DRSC/TRiP Functional Genomics Resources

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Protein Alignment MESR4 and ing-3

DIOPT Version :10

Sequence 1:NP_523775.2 Gene:MESR4 / 36986 FlyBaseID:FBgn0034240 Length:2171 Species:Drosophila melanogaster
Sequence 2:NP_496909.1 Gene:ing-3 / 3564936 WormBaseID:WBGene00013095 Length:490 Species:Caenorhabditis elegans


Alignment Length:807 Identity:138/807 - (17%)
Similarity:227/807 - (28%) Gaps:357/807 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly  1366 EKLEDIKEELEEGEDEKEGAHNQEKLLSESLTNNETPKKEESDRIDNSIEPPLSKSENRKRRKKS 1430
            |.|:::..||:|..||..                         ||||.:|..|:           
 Worm     9 EMLDELPAELKERSDEIR-------------------------RIDNEVESRLN----------- 37

  Fly  1431 KRNKESLEDLNLIAPNLSESDSSDDSDSDAPRSSHQEQPKLPMR--SSVDDLDMPKVMLSPSSES 1493
             ||:|::.|.            .:.:..:.|....:|:.|:...  |::..|...|.:::...: 
 Worm    38 -RNREAINDF------------FERTGVNMPEEQRKERCKVLQEEFSTIRVLAQRKYLIAEKMQ- 88

  Fly  1494 DADELDGKSKLEDKEEKPLDGSTEEKALDADD----ELEPKKEEDQVDVSIWKNLLQNQAVAIPE 1554
               ||..|.|:..::||    :|.:..::||:    |:..|:....|:     :||         
 Worm    89 ---ELLKKYKVHLEKEK----TTFQCEMEADNSGVTEMIEKRYTQHVE-----SLL--------- 132

  Fly  1555 EQAVKDEEREDSLVNLPPAKLHVAWSDHDYCKLYRTPAPSPVKQKSANKSSIKTPGENASSDSDS 1619
             .|.|:.:|...:                                                    
 Worm   133 -TARKERKRRHRV---------------------------------------------------- 144

  Fly  1620 SSSSSSSDSDSSSCSCGSNCSCSSSNSSSSSGNSDDSDSSTARGSP--QKRSRKKSLKVKKSSES 1682
                                      .....|....|.:||....|  .|.|:.|..::.:....
 Worm   145 --------------------------GGGGGGGGSSSRASTVASGPLLSKESKDKIQRILQEGVR 183

  Fly  1683 LKIDQNGQNEQNQVEDTTAVNENNNPVAPPSPKPPMYNESDFDTAFSDTDEEFYDSHPQKLANEL 1747
            |::|.:.::.|:.:..           |.|||.|                    ...|.|:|.:.
 Worm   184 LRMDLSDESAQSALSS-----------AIPSPAP--------------------RGRPPKIAKDQ 217

  Fly  1748 LTQKREALMAEH------APMRPSNNYDIVENSRPSTPSLPEEASAFADKREKVRNKKKKRERKS 1806
            |.....|::...      .|..|:.......|:...|.|:|...|:..::.|...........:|
 Worm   218 LLLSSAAMVVASDDCLTPVPPTPTARRRSNTNALRGTVSIPSALSSMMNRGESTSRFSPNPSERS 282

  Fly  1807 TCKSGKLQPVASTTPPPMDRIPGMPGMIAPLEPPTPILSHPESSLFPVTPLTHRQLQSSMTRMSE 1871
            ...:|    :..::|.|...:         |..|| ..|.|...:.|.||:    ||:|...:||
 Worm   283 WSNAG----IDESSPTPTTSL---------LMTPT-FSSGPHIVVSPTTPV----LQNSAFVVSE 329

  Fly  1872 GSSCSDADGQLKRSKRQRRPNKFYGYTSDDENMSAVLAPPLQVGMQLIKPQPPPQLTWAKEDLPT 1936
                       .|..|.|:      .||..:.|                         .||.|  
 Worm   330 -----------SRHGRTRK------LTSRVQEM-------------------------FKETL-- 350

  Fly  1937 PPKQRNRNNNNSSHHHHSHSNGGMAGSSRKRSKQRSLFGAGGSRPAKRHKPDPNDHLPPIPTLKI 2001
               ||.||          |.|..:|...|        ..|.....|.:|...|....|..|.   
 Worm   351 ---QRQRN----------HGNSIIALQER--------MSAANLAAAAQHAHAPTSSSPQSPL--- 391

  Fly  2002 RPSLLPTTAPPSDSSESSSDDEEAEVNVTSVVPTPQPAPPPVLPTPLPVALPVPPPPPPAATAFN 2066
                      |.....:..||||                                          
 Worm   392 ----------PEIEGAAEDDDEE------------------------------------------ 404

  Fly  2067 QPIPPALLPNPGFATLQYFKANNIRYPIRPPAGARLAREGESVYCYCRCPYDEVS--EMIACDGD 2129
                     .|.:...:       .:|:..|...  ..|.|..:|:|    :|.|  :|:.||..
 Worm   405 ---------GPSYRIKR-------SHPMMAPGSE--DEEDEMHWCFC----NEKSYGDMVQCDNR 447

  Fly  2130 NCLIEWFHFECVGIMVAPQGKWFCAEC 2156
            :|.:.|||:.|:|::..|.|||:|..|
 Worm   448 HCTLRWFHYPCIGMVEPPTGKWYCPRC 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MESR4NP_523775.2 C2H2 Zn finger 1272..1288 CDD:275368
zf-C2H2 1293..1315 CDD:395048
C2H2 Zn finger 1295..1315 CDD:275370
C2H2 Zn finger 1323..1341 CDD:275370
PHD_ING 2110..2156 CDD:276980 18/47 (38%)
ing-3NP_496909.1 ING 3..101 CDD:463768 27/144 (19%)
KAR9 <194..318 CDD:430088 29/168 (17%)
TNG2 <384..475 CDD:227367 31/168 (18%)
PHD_ING 430..474 CDD:276980 18/47 (38%)
Blue background indicates that the domain is not in the aligned region.

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