DRSC/TRiP Functional Genomics Resources

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Protein Alignment MESR4 and phf-34

DIOPT Version :9

Sequence 1:NP_001097359.1 Gene:MESR4 / 36986 FlyBaseID:FBgn0034240 Length:2171 Species:Drosophila melanogaster
Sequence 2:NP_509661.1 Gene:phf-34 / 184793 WormBaseID:WBGene00009025 Length:246 Species:Caenorhabditis elegans


Alignment Length:190 Identity:38/190 - (20%)
Similarity:74/190 - (38%) Gaps:38/190 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   458 GTTRSRSISSRSSTVSSASQPHLVIDHPESEHNAKPPA-----LKLSLKRRRSK-SSSVSQPE-- 514
            |.:.||..:.....::.....||  |...||..||..|     |...||:.::| ...:.:.|  
 Worm    72 GLSASRFTAEEIENMTELCPTHL--DEQLSEERAKAKAALEAKLAKQLKQMQAKHRKEIKEAEMA 134

  Fly   515 ------KQTKVEAGGFVSSLLLQRLQSNSNVIPPAISTESQQVLSCAKCNLQFDFERFQELNKHQ 573
                  |:|||...|.::.:..:          .|.:.:.:|||...:..::.:.|   :::::.
 Worm   135 KTIRSTKKTKVGKNGKIAKVDKK----------TAKTVKEKQVLDLPQPKIEINDE---DIDQYI 186

  Fly   574 AQCSGIQSANSSQ----LSQKQERFFRCSQCCSVHQCWHF----FLHMREVHRRYICLYC 625
            .:.:..:..|.::    ...|..:|..|. |......:|.    |...:||..::.|.||
 Worm   187 LEQAAPKKKNVTRWICPTCDKSSKFGSCG-CVGCGDWYHITCVGFKKAKEVPDKWACKYC 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MESR4NP_001097359.1 C2H2 Zn finger 1272..1288 CDD:275368
C2H2 Zn finger 1295..1315 CDD:275370
C2H2 Zn finger 1323..1341 CDD:275370
PHD_ING 2110..2156 CDD:276980
phf-34NP_509661.1 PHD 201..245 CDD:214584 9/44 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5034
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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