DRSC/TRiP Functional Genomics Resources

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Protein Alignment MESR4 and egl-43

DIOPT Version :9

Sequence 1:NP_001097359.1 Gene:MESR4 / 36986 FlyBaseID:FBgn0034240 Length:2171 Species:Drosophila melanogaster
Sequence 2:NP_001022288.1 Gene:egl-43 / 174552 WormBaseID:WBGene00001207 Length:543 Species:Caenorhabditis elegans


Alignment Length:587 Identity:106/587 - (18%)
Similarity:169/587 - (28%) Gaps:211/587 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 TPVDLGA----NCLTTGSPSKD---LVKQELVEDKSEELKEPTSISLNEQFLDDIELKTEVEDKS 194
            ||.|..|    |.:......:|   .::|   ||:...|:....|::.|:.|    |:...|::.
 Worm    42 TPNDSNALLILNLIKEADDGEDANICMRQ---EDRKTFLQTSKIINIGERLL----LQRLSEEEC 99

  Fly   195 DSLSETHME--FLTDSEEQPSESLGANHESEIDEKVDHFQ------------------------- 232
            |...:..:|  .|...|::|..:......|..|..::.|:                         
 Worm   100 DEEDQDDLENLILLKDEDRPDSTQSCTKSSSEDSNLNGFEEYIREHGELVPGQTPPDGSHKCGVC 164

  Fly   233 PKESDS-------------------NEVEDKYFQSANEDSESEIEETVYTPPVINLETDSESGDK 278
            ||...|                   :.....|.|.:|......:....:|.|....:..|::.  
 Worm   165 PKSFSSASGLKQHSHIHCSLKPFRCHLCPKSYTQFSNLCRHRRVHSDGWTCPTCQSQMPSQAA-- 227

  Fly   279 EFISIKDNESPVLEIE----------GGTEKSQTSGDL-YQADVGEYASTAP----------PEV 322
                 .....||.|:.          .|...:...|.: |...:.:.|:.||          ||.
 Worm   228 -----LTKHRPVCEMTALYKPLMAQLAGLSGAGGLGSVPYWPHILQMATQAPHFPLAFLAANPEA 287

  Fly   323 DETTSQ-TIGVPSLE---GSDTLDSPSLTMDVDLPCSEDGAPPNVIKIESDMEDEAHSDSVKLKE 383
            .:...| |...|..|   |..:..||:.|..|||..:.  .||:.    |:||..:.||      
 Worm   288 YKLMQQTTCASPDAECSSGHASESSPTTTEPVDLTATP--KPPST----SEMETTSKSD------ 340

  Fly   384 HTVEVVPLIKLNGAHKALKEEKLEDGE-VEEVEDPGEELEDPKEQSVITNHTGNNTKEEDTTASQ 447
                                    ||| .:.:.|.|.:.:|..|..|:        .|..||.| 
 Worm   341 ------------------------DGEDRDSIGDSGNDDDDDSEAGVL--------DESSTTTS- 372

  Fly   448 VSALPLILPVGTTRSRSISSRSSTVSSASQPHLVIDHPESEHNAKPPALKLSLKRRRSKSSSVSQ 512
                        |:.|..|...|.:.:|         |:....|........|:|..:.:.:|..
 Worm   373 ------------TKKRPTSHTISDILAA---------PQLGAQALNSTFLGMLQRSLNYNPAVPS 416

  Fly   513 PEKQTKVEAGGFVSSLLLQRLQSNSNVIPPAISTESQQVLSCAKCNLQFDFERFQELNKHQAQCS 577
            |....:..:|...||            .|.:.|...:...:|..|  |..|.|...|.:|....:
 Worm   417 PHSFLRAMSGAKASS------------SPSSSSGSGKDRYTCKFC--QKVFPRSANLTRHLRTHT 467

  Fly   578 GIQSANSSQLSQKQERFFRCSQCCSVHQCWHFFLHMREVHRRYICLYCNHVYPSVEKLSLHLENK 642
            |.|.                                      |.|.||...:.....|..|:.|.
 Worm   468 GEQP--------------------------------------YKCQYCERSFSISSNLQRHVRNI 494

  Fly   643 HD 644
            |:
 Worm   495 HN 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MESR4NP_001097359.1 C2H2 Zn finger 1272..1288 CDD:275368
C2H2 Zn finger 1295..1315 CDD:275370
C2H2 Zn finger 1323..1341 CDD:275370
PHD_ING 2110..2156 CDD:276980
egl-43NP_001022288.1 SFP1 <115..210 CDD:227516 11/94 (12%)
C2H2 Zn finger 161..181 CDD:275368 3/19 (16%)
C2H2 Zn finger 189..209 CDD:275368 3/19 (16%)
C2H2 Zn finger 215..232 CDD:275368 2/23 (9%)
zf-C2H2 444..466 CDD:395048 7/23 (30%)
C2H2 Zn finger 446..466 CDD:275368 7/21 (33%)
zf-H2C2_2 458..482 CDD:404364 8/61 (13%)
C2H2 Zn finger 474..495 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24393
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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