DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MESR4 and LOC101884644

DIOPT Version :9

Sequence 1:NP_001097359.1 Gene:MESR4 / 36986 FlyBaseID:FBgn0034240 Length:2171 Species:Drosophila melanogaster
Sequence 2:XP_009297415.1 Gene:LOC101884644 / 101884644 -ID:- Length:555 Species:Danio rerio


Alignment Length:386 Identity:84/386 - (21%)
Similarity:146/386 - (37%) Gaps:81/386 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1116 LENGKYVEPFNERIYECFTCRFV--TSTHKELYTHNRRLHIKSNI-TCVMCQTNFYSYSEILCHI 1177
            |:..:..|....:..:||||...  :.:||:....:.|:|...|: ||..|..:......:..|:
Zfish     8 LKTTETTELLKRKAKKCFTCTQCGKSLSHKKTLKVHMRIHTGENLFTCSQCGKSMTCKQTLKNHM 72

  Fly  1178 CPGEVAGSVY--DLQFRCCLC--DMAPLPS-AFRLMVHLRKQHQACDICLEDCQSQSKLSSHVWK 1237
                   .|:  :..|.|..|  .:...|| ||.:.:|..::...|..|.|..:..|.|:.|:..
Zfish    73 -------KVHSEEKPFTCTQCGKGLKSKPSLAFHMRIHTGEKPFTCSQCRESFRHSSSLNRHMLI 130

  Fly  1238 H--KLLHLCYRCGIAYRNKQDISKHLFWKHGTESAGCKQCLQKRWRHVYHFCVPP------AEFP 1294
            |  :..|.|.:|...:....::.:||  :..|:...|..| .|.:::::...|..      .||.
Zfish   131 HTGEKTHKCDQCSKTFLRSSELKRHL--RAHTKHLLCPSC-GKSFKYLHSLKVHERIHTGVREFM 192

  Fly  1295 CEQCGFVFSKAIYLEVHQRMHTGDFRYACTEEGCEEKFVSRKLLLKHASSHVA----------KE 1349
            |.:|...|..|..|::|||:|||:..|.|:.  |:::|.....|..|..:|..          |.
Zfish   193 CFECEKTFMTAKNLKLHQRIHTGEKPYKCSH--CDKRFSHLGSLKNHERTHTGEKPYKCSQCDKR 255

  Fly  1350 LPQAVSVEQTADAAPTEK-------------LEDIKEE--LEEGED-------EKEGAHNQEKLL 1392
            ..|:|.::........:|             :..:|:.  :..||.       :|...|::...:
Zfish   256 FSQSVGLKSHERIHTGKKPYKCLLCGKRFRHVGSLKKHKMVHTGEKPYKCSHCDKRFRHSEVLKI 320

  Fly  1393 SESLTNNETPKK--------------EESDRIDNSIEPPLSKSENRKR------RKKSKRN 1433
            .|.:...|.|.|              :..:|:... |.|...|...||      .|..|||
Zfish   321 HEMIHTGEKPHKCSSCDKRFRHLGTLKRHERVHTG-EKPYKCSHCDKRFNHLEGLKLHKRN 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MESR4NP_001097359.1 C2H2 Zn finger 1272..1288 CDD:275368 3/15 (20%)
C2H2 Zn finger 1295..1315 CDD:275370 8/19 (42%)
C2H2 Zn finger 1323..1341 CDD:275370 4/17 (24%)
PHD_ING 2110..2156 CDD:276980
LOC101884644XP_009297415.1 C2H2 Zn finger 27..47 CDD:275368 4/19 (21%)
C2H2 Zn finger 55..75 CDD:275368 3/26 (12%)
C2H2 Zn finger 83..103 CDD:275368 6/19 (32%)
COG5048 107..534 CDD:227381 60/280 (21%)
C2H2 Zn finger 111..131 CDD:275368 6/19 (32%)
C2H2 Zn finger 139..159 CDD:275368 4/21 (19%)
C2H2 Zn finger 165..185 CDD:275368 4/20 (20%)
C2H2 Zn finger 193..213 CDD:275368 8/19 (42%)
zf-H2C2_2 205..230 CDD:290200 11/26 (42%)
C2H2 Zn finger 221..241 CDD:275368 5/21 (24%)
zf-H2C2_2 233..258 CDD:290200 4/24 (17%)
C2H2 Zn finger 249..269 CDD:275368 3/19 (16%)
C2H2 Zn finger 277..297 CDD:275368 1/19 (5%)
C2H2 Zn finger 305..325 CDD:275368 3/19 (16%)
C2H2 Zn finger 333..353 CDD:275368 1/19 (5%)
zf-H2C2_2 346..370 CDD:290200 6/24 (25%)
C2H2 Zn finger 361..381 CDD:275368 7/20 (35%)
C2H2 Zn finger 389..409 CDD:275368
C2H2 Zn finger 417..437 CDD:275368
C2H2 Zn finger 445..465 CDD:275368
C2H2 Zn finger 473..493 CDD:275368
C2H2 Zn finger 501..521 CDD:275368
C2H2 Zn finger 529..549 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1434088at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.