Sequence 1: | NP_001097359.1 | Gene: | MESR4 / 36986 | FlyBaseID: | FBgn0034240 | Length: | 2171 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038967290.1 | Gene: | Prdm16 / 100366024 | RGDID: | 2324431 | Length: | 1276 | Species: | Rattus norvegicus |
Alignment Length: | 1212 | Identity: | 241/1212 - (19%) |
---|---|---|---|
Similarity: | 358/1212 - (29%) | Gaps: | 405/1212 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 543 AISTESQQVLSCAKCNLQF------DFERFQELNKHQAQCSGIQSANSSQLSQKQERFFRCSQCC 601
Fly 602 SVHQCWHFFLHMREVHRRYIC------LY-------------------------CNHVYPSVEKL 635
Fly 636 SLHL-----ENKHDIDQSHFA---KDAWDQQQSKEDRARHLVCCTCQATFVQGSEFEDH------ 686
Fly 687 --------DCSQ---------------------LMQPC--------ALCNQKGGHI-----IGCK 709
Fly 710 N--NKRKPTKRRRKVRRPPE------------PPLPVSQEAVEQPVPVEAIPEQLPQQLHLQSDI 760
Fly 761 QNPFPAENIPAPEPVE-DPPA------------PPI----PKLVVPKIMLRVPKEFQKSVDAAL- 807
Fly 808 -----------SSTDTEDEELETAQPVEEAVSAPPEDLPFDAPPPPPPALSYDDSTSSKLNRVL- 860
Fly 861 AELERT---------KLDIERTKA-DIITKKQSKIIMANAHLENVVPQVVDPPQHLQPQQEEQRR 915
Fly 916 WSLTPPASPHNNHVNLPEPPPALITEFQGQPDAVR------RNSLGSDCMDMDDSLNAPEMEGSR 974
Fly 975 DFTEAQKETLEPAPPSQDTQTADEPLA------IQPLPPADGIMVAGPDTHTVDLQLDRPLDRFS 1033
Fly 1034 MVDFVRLCLKSVYSLCLYCNHARRIAVNVKQLVIHLIGQHRFTATVDSITAEELYAETIVAKLKS 1098
Fly 1099 FLPNLENEYMNAASCCSLENGKYVEPFNERIYECFTCRFVTSTHKELYTHNRRLHIKSNITCVMC 1163
Fly 1164 QTNFYSYSEILCHICPGEVAGSVYDLQFRCCLCDMAPLPSAFRL-----MVHLRKQHQACDICLE 1223
Fly 1224 DCQSQSKLSSHVWKHKLLHLCYRCGIAYRNKQDISKHLFWKHGTES-----AGCKQCLQKRWRHV 1283
Fly 1284 YHFCVPP------------AEFPCEQCGFVFSKAIYLEVHQRMHTGDFRYACTEEGCEEKFVSRK 1336
Fly 1337 LLLKHASSHVAKELPQAVSVEQTADAAPTEKLEDIKEELEEGEDEKEGAHNQEKLLSESLTNNET 1401
Fly 1402 PKKEESDRIDNSIEPPLSKSENRKRRKKSKRNKESLEDLNLIAPNLSESDSSDDSDSDAPRSSHQ 1466
Fly 1467 EQPKLPMRSSVDDLD-MPKVMLSPSSESDADELDGKSKLEDKEEKPLDGSTEEKALDA--DDELE 1528
Fly 1529 PKKEEDQVDVSIWKNLLQNQAVAIPEEQAVKDEEREDSLVNL 1570 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
MESR4 | NP_001097359.1 | C2H2 Zn finger | 1272..1288 | CDD:275368 | 4/15 (27%) |
C2H2 Zn finger | 1295..1315 | CDD:275370 | 7/19 (37%) | ||
C2H2 Zn finger | 1323..1341 | CDD:275370 | 4/17 (24%) | ||
PHD_ING | 2110..2156 | CDD:276980 | |||
Prdm16 | XP_038967290.1 | PR-SET_PRDM16 | 61..222 | CDD:380990 | 13/49 (27%) |
C2H2 Zn finger | 232..252 | CDD:275368 | 7/23 (30%) | ||
zf-C2H2 | 282..304 | CDD:395048 | 4/21 (19%) | ||
C2H2 Zn finger | 284..304 | CDD:275368 | 4/19 (21%) | ||
zf-H2C2_2 | 296..320 | CDD:404364 | 6/23 (26%) | ||
zf-C2H2 | 310..332 | CDD:395048 | 5/21 (24%) | ||
C2H2 Zn finger | 312..332 | CDD:275368 | 5/19 (26%) | ||
zf-C2H2 | 338..359 | CDD:395048 | 5/20 (25%) | ||
C2H2 Zn finger | 340..358 | CDD:275368 | 5/17 (29%) | ||
zf-C2H2 | 367..389 | CDD:395048 | 2/21 (10%) | ||
C2H2 Zn finger | 369..389 | CDD:275368 | 2/19 (11%) | ||
zf-C2H2 | 395..417 | CDD:395048 | 4/21 (19%) | ||
C2H2 Zn finger | 397..417 | CDD:275368 | 4/19 (21%) | ||
C2H2 Zn finger | 426..444 | CDD:275368 | 4/17 (24%) | ||
zf-C2H2 | 952..974 | CDD:395048 | 7/21 (33%) | ||
C2H2 Zn finger | 954..974 | CDD:275368 | 7/19 (37%) | ||
zf-H2C2_2 | 966..990 | CDD:404364 | 9/25 (36%) | ||
SUF4-like | 982..>1016 | CDD:411020 | 8/35 (23%) | ||
C2H2 Zn finger | 982..1008 | CDD:411020 | 7/27 (26%) | ||
C2H2 Zn finger | 982..1003 | CDD:275368 | 5/22 (23%) | ||
zf-C2H2 | 1009..1031 | CDD:395048 | 2/21 (10%) | ||
C2H2 Zn finger | 1011..1031 | CDD:275368 | 2/19 (11%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24393 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |