DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL18A and RPL18A

DIOPT Version :9

Sequence 1:NP_523774.1 Gene:RpL18A / 36985 FlyBaseID:FBgn0010409 Length:177 Species:Drosophila melanogaster
Sequence 2:NP_000971.1 Gene:RPL18A / 6142 HGNCID:10311 Length:176 Species:Homo sapiens


Alignment Length:176 Identity:121/176 - (68%)
Similarity:146/176 - (82%) Gaps:0/176 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIK 65
            |:|.|.|:||:||||.||:.|....|||:||||||:::|||||||||:.||||.||::||||...
Human     1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCG 65

  Fly    66 QVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVD 130
            ||:|.||:::||||||||||||||||||||||||||..|||||||||||||||||||||||:||:
Human    66 QVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVE 130

  Fly   131 SIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176
            .|.|:|.||..|||||||||||||..||..:.::..|:.::|.|:|
Human   131 EIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL18ANP_523774.1 RPL20A 69..153 CDD:225068 69/83 (83%)
RPL18ANP_000971.1 RPL20A 69..153 CDD:225068 69/83 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158670
Domainoid 1 1.000 200 1.000 Domainoid score I3053
eggNOG 1 0.900 - - E1_COG2157
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68104
Inparanoid 1 1.050 253 1.000 Inparanoid score I3203
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53815
OrthoDB 1 1.010 - - D1265349at2759
OrthoFinder 1 1.000 - - FOG0002143
OrthoInspector 1 1.000 - - oto90399
orthoMCL 1 0.900 - - OOG6_101208
Panther 1 1.100 - - LDO PTHR10052
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1116
SonicParanoid 1 1.000 - - X1428
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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