DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL18A and rpl18a

DIOPT Version :10

Sequence 1:NP_523774.1 Gene:RpL18A / 36985 FlyBaseID:FBgn0010409 Length:177 Species:Drosophila melanogaster
Sequence 2:NP_957354.1 Gene:rpl18a / 394035 ZFINID:ZDB-GENE-040426-1071 Length:176 Species:Danio rerio


Alignment Length:176 Identity:120/176 - (68%)
Similarity:143/176 - (81%) Gaps:0/176 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIK 65
            |:|.|.|:||:||||.|||.|.|..|||:||||||:::|||||||||:.||:|.||.:||||...
Zfish     1 MKASGTLREYKVVGRLLPSVKNPAPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKASGEIVYCG 65

  Fly    66 QVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVD 130
            .|:|.||:|:||||||||||||||||||||||||||..|||||||||||||||||||:|||:||.
Zfish    66 LVFEKSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRARAHAIQIMKVQ 130

  Fly   131 SIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176
            .|.|.|.||..:||||||||||||..||..:.::..|:.::|.|:|
Zfish   131 VIAANKCRRPAIKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL18ANP_523774.1 Ribosomal_L18A 83..129 CDD:396369 41/45 (91%)
rpl18aNP_957354.1 Ribosomal_L18A 83..130 CDD:396369 42/46 (91%)

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