DRSC/TRiP Functional Genomics Resources

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Protein Alignment cyp33 and AT4G34960

DIOPT Version :9

Sequence 1:NP_523773.1 Gene:cyp33 / 36984 FlyBaseID:FBgn0028382 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_195222.1 Gene:AT4G34960 / 829648 AraportID:AT4G34960 Length:224 Species:Arabidopsis thaliana


Alignment Length:178 Identity:86/178 - (48%)
Similarity:110/178 - (61%) Gaps:9/178 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 VIEKAEKRNPQVFFDIRIGGNDAGRIVMLLRADVVPKTAENFRQLCTHEQG-------YGYKGCS 187
            |||..|..| :||.|:.|.|...||||:.|...|||||.||||.|||.|:|       ..|||..
plant    39 VIEDHEITN-RVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTP 102

  Fly   188 FHRVIPEFMCQGGDFTNNNGTGGKSIYGKKFNDENFNLKHNSFGTLSMANSGANTNGSQFFICTT 252
            |||:|..|:.||||..:.:|....||||..|.||||.::|:..|.::|||:|.::|||||||.|.
plant   103 FHRIISGFVIQGGDIIHGDGKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTV 167

  Fly   253 KTDWLDNKHVVFGHVISGAEVVRKME-RCGSKSGTPSQKIVIYSCGEL 299
            |..||:.:|||.|.||.|.:.|..:| ..|:.||.|.:|:||...||:
plant   168 KASWLEGEHVVLGKVIQGMDNVFAIEGGAGTYSGKPRKKVVIADSGEI 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cyp33NP_523773.1 RRM_PPIE 8..80 CDD:240793
cyclophilin_ABH_like 139..297 CDD:238907 79/165 (48%)
AT4G34960NP_195222.1 cyclophilin 48..213 CDD:412213 79/164 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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