DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3b and eif-2A

DIOPT Version :9

Sequence 1:NP_611228.1 Gene:eIF3b / 36981 FlyBaseID:FBgn0034237 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_496239.2 Gene:eif-2A / 174606 WormBaseID:WBGene00008480 Length:570 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3bNP_611228.1 WD40 <216..352 CDD:295369
WD40 repeat 216..248 CDD:293791
WD40 repeat 297..321 CDD:293791
RRM_eIF3B 56..137 CDD:240724
COG5354 194..690 CDD:227657
eif-2ANP_496239.2 eIF2A 218..415 CDD:285825
WD40 <223..394 CDD:295369
WD40 repeat 280..318 CDD:293791
WD40 repeat 321..358 CDD:293791
WD40 repeat 365..405 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D262412at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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