DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patronin and camsap2b

DIOPT Version :9

Sequence 1:NP_001261051.1 Gene:Patronin / 36978 FlyBaseID:FBgn0263197 Length:1689 Species:Drosophila melanogaster
Sequence 2:XP_009297074.1 Gene:camsap2b / 558673 ZFINID:ZDB-GENE-070912-80 Length:1429 Species:Danio rerio


Alignment Length:1848 Identity:395/1848 - (21%)
Similarity:666/1848 - (36%) Gaps:627/1848 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EIRQARQRASVKWLLSKAF-NNRVPDNLKEPFYRDHENQERLKPQIIVELGNATLYCQT-LANLY 69
            :..:|:...|:.||::||| ::.||..|::|||||..:||.:||.::..|.:|.|||:. ...|.
Zfish    35 DFSRAKISCSLTWLIAKAFGSDCVPVELEDPFYRDQYDQEHVKPPVVSLLLSAELYCRAGSLILR 99

  Fly    70 SDPNYQSMNHWSIIQTLARKGVPVAESADMPITETVLIQTNPLRINAHMSVIESLMVLYAKEISS 134
            ||.....:.|.::||.||:|.:.|.:...: :||..|.:| |:::::|:::|::||:.|..|:.|
Zfish   100 SDAAKPLLGHNAVIQALAQKALYVTDQERL-VTERDLCKT-PIQMSSHLAMIDTLMMAYTVEMVS 162

  Fly   135 GDRVMAAIRRISGNNYQAPTGQSYEQALLGWISHACAALKKRIIKEVDAGLPDD----------- 188
            .:||::.|::.:....:.......|:|:..||:.....|::.:..|.:|...|:           
Zfish   163 VERVLSCIQKFTPFLPEEDFPYDAEEAVTTWINKVNEHLREILALEKNAKGADEPSTLQKGRYRR 227

  Fly   189 NGSRLQTPDIPPVRD--FQDLCDGICLALLISYYCPKVVPWTSVRINYLPAVEDSIHNILLVCNF 251
            :.|:.......|:.|  .:|..||..||||:.:|||..||...|.:....::.||::|:.|:..|
Zfish   228 DESKAHPALCVPLVDSLLKDNTDGCALALLLHFYCPDAVPLEDVCVKETMSLADSLYNLQLIQEF 292

  Fly   252 SQKHLPYTVMHMTPEDVTYMRGSMKLNLVVLLTDLFNLFEIHPAKCVCYPGMDGQVPHSNSF--- 313
            .:::| ....|.|.||:.|...::|.|.:|.:.:||...|:.....|....::.:...|:..   
Zfish   293 CRENL-NNCCHFTLEDMLYASSTIKSNYLVFMAELFWWCEVVKPSFVQPRTVNTKASDSSQSSKM 356

  Fly   314 ------------GGGLNRRSTPPNEYQTV--QSNNF---DG------------NHAEAF------ 343
                        |.....||.|.|:...|  :|::.   ||            .|..:|      
Zfish   357 APITKQNLIHRPGSPEQSRSQPNNDSSAVIRRSSSMSYVDGCVGTWPKEKRSSAHGISFEIPLDD 421

  Fly   344 ----------------------VVHKSRGI---TTLASMHSQQQQQLHQQQQHQQQYHQQPLQQH 383
                                  |.|.:||:   .:...::.....::|::.....   .:|:.:|
Zfish   422 RTSSSSGRGLSRSVSTEGLGFKVHHAARGMRRNLSFQPVNGNAHSKIHEEDGEDS---NRPISRH 483

  Fly   384 ----------------PSQSQLQIQQQEPLVPARLR----QAKEKTNVESKADERGDFV------ 422
                            || .....|...|.:...|:    ..:.::::...:.:...|:      
Zfish   484 RLGTYTGYTNGVSTGNPS-PPYDAQPSTPSIEEALKIIHDSERPQSSLPPPSGDSAFFLHNPSSS 547

  Fly   423 -AAGRPSNWEQSRRPSFAGRRSRRNSSSEDSQLTI----ENFGGSQDQLNTLGRY---ERDRERK 479
             :|..|:..|.|...:.|. .:..||:|.|....|    |:....||:.::|..|   ::|.|.:
Zfish   548 NSASDPNEPEDSLNKARAD-DADLNSTSTDMDTGIHVRTEDIQDGQDEDSSLKDYSDMDQDYEAR 611

  Fly   480 ---LSNTSVGSYPVEPAVAVRSSIADARGTLQLGYDTDSGSEKQDRETEKYSMRRQVSVDNVPTV 541
               |.:|| || |....:..||.......:|.......|.:|::.|:......|...|..|.|..
Zfish   612 SCPLPDTS-GS-PCPSLLGTRSLATSMASSLGSAIRMTSFAEQKFRKLNHGDGRSSGSGGNTPET 674

  Fly   542 SSHNLSNAGSPLPVARHKQHSSDKDYSSNSGMTPDAYNDSRSTSGYDPESTPVRKSSTSSMPASP 606
            :..|.:..|:               |.:...:|||.::.:|.||..||                 
Zfish   675 AELNATTPGA---------------YGTVRSVTPDTHSPARITSPRDP----------------- 707

  Fly   607 AAWQLDVGDDDMRSLENASKLSTIRMKLEEKRRRIEQDKRKIEMALLRHQE-------------- 657
                         |...||::..::||||||||.||..|:|:|.|..||::              
Zfish   708 -------------SHLLASEMVQLKMKLEEKRRAIEAQKKKVEAAFTRHRQRMGRTAFLNVVRRK 759

  Fly   658 ---------------KEDLESCPDVMKWETMSNES-----KRTPDMDP-----------VDLDKY 691
                           :|...:.|:..|.....|:|     :..||..|           |||.:|
Zfish   760 GVVSPLGGSSEGPDGREKTTNDPEPQKSPLTLNDSNARLERCRPDGAPPKSPLEDAGVEVDLTEY 824

  Fly   692 QQSIAIMNMNLQDIQQDIHRLATQQSQMQAQHLQAQQLMQAQQIANMLNQQQTYGSQQHLADHHY 756
            .:||..:|.:|..:|.::.|||.||          :::||                         
Zfish   825 TRSIERLNTSLGFLQSEMQRLAQQQ----------ERIMQ------------------------- 854

  Fly   757 QQQRPMQQSFGSSPHLPQAYNAPVSAYSSRPPSRDPYQQQLHHQQQQPMPMPQPMQYVNEHGQY- 820
                                                                     :.||..: 
Zfish   855 ---------------------------------------------------------MREHQSWV 862

  Fly   821 MSPPQPAHYMPQQAQQPQSIYSDNGAAYNHSNHSPYGGTPQYRSSVVYDDYGQPTNHFYLHESSP 885
            :|||.|                           ||.....:.|||.|.                 
Zfish   863 ISPPDP---------------------------SPRKQFRELRSSSVV----------------- 883

  Fly   886 QPQAHQHPQRRTWAHSAAAAAYEQQQQIQPSLVDVNAWQTQQHQKQKQTWMNRPPSSAGAPSPGS 950
                                                                             
Zfish   884 ----------------------------------------------------------------- 883

  Fly   951 FMLHQNGGGGGGGGGGGELQHLFQVQASPQHGQRQVSGSNGVQRQQSLTNLRDNRSPKAPQNMGM 1015
                       |.|..|.|..:.....||:...|..|   .::|:.:..:.|..|:|: |.::.:
Zfish   884 -----------GRGSVGSLSPILSSTGSPRTTHRSPS---TIKRKSASFHARTPRTPR-PNDLKV 933

  Fly  1016 PMGMPMQQEDMMAPQSICFIGDEEDVDELERNIIESMQSTHISDFVHQQQQQHQHQQQLQQQQRL 1080
            .....|    :..|||         ||.|.|                                  
Zfish   934 TSFSRM----LNTPQS---------VDSLPR---------------------------------- 951

  Fly  1081 QGHSGRGSSSEDYDSGEMISNKLNITSGNLTYRIPSPSRPSIQANSF--QDPRAMAAASGGEDQP 1143
                                           .|...||:|.|.:.::  .|.||::         
Zfish   952 -------------------------------LRRVLPSQPQISSFAYLGSDERALS--------- 976

  Fly  1144 PEKGFYISFDDEQPKRPKPPLRAKRSPKKESPPGSRDSVDNQATLKRESLSHLHNNNNIGFGNDD 1208
                      .||..:.||           ..|.|:|:..:|       :|........|.|..|
Zfish   977 ----------KEQSDKEKP-----------CKPESKDTAADQ-------MSEKQKEEKRGTGESD 1013

  Fly  1209 VNSKPVTRHSIHGLNNSNSVKSPGNATYNKYTDEPPIQLRQLAVSGAMSPTSNERHHLDDVSNQS 1273
            ..:|.:|          :.|.:.||.  |:...|....|.::.:| .:.|       ||....:|
Zfish  1014 KLTKALT----------SEVTASGNT--NEEESEESKDLIEVPLS-VLKP-------LDGHELES 1058

  Fly  1274 PQQTQQPMSPTRLQQSSNNAEAAKNKALVIGADSTNLDPESVDEMERRKEKIMLLSLQRRQQQEE 1338
            .::|:..:.            :..::.:..|....: |.:..:::.::|..:|...|:|.::.:.
Zfish  1059 SRETETGLG------------SKPDQKMCCGFFYRD-DLQGEEDIAQKKAALMEKRLRREKEMQI 1110

  Fly  1339 AKARKEIEASQKREKEREKEEERARKKEEQMARRAAILEQHRLKKAIEEAEREGKTLDRPDLHVK 1403
            .|.::|.|..||:|..|.|.||..:|||::.|||..|..:|..:|                 .:|
Zfish  1111 KKQQQEAEIEQKKEAARMKVEEERQKKEDEKARREYIKHEHMRRK-----------------QLK 1158

  Fly  1404 LQSHSSTSTTPRLRQQRTTRPRPKTIHVDDASVDISE--------ASSISSRGKKGSSSNLTGYG 1460
            |.....:...|.....:..:||||::|     .||.|        |:....||...||.:|....
Zfish  1159 LMEDMDSVIKPSPSGAKQKKPRPKSMH-----RDIMESPKPPARTATGSRPRGYSVSSISLASLN 1218

  Fly  1461 QLSSNSMKRDYYRGSQDSLTVKDSGLGRATPPRRAPSPGMGMGASGRHMPSPSGPGSLPPGLISK 1525
            ...:.|::.|........|:........::|..|...|   ..|.|...|.||..|:      .:
Zfish  1219 LADNESIQSDKRTSRGSRLSPGSLCFFLSSPKGRKGRP---ESAEGFLSPCPSVSGN------GE 1274

  Fly  1526 RRGFDDGSSDFSLTPNLNMEYSGPKLYKQPAAKSNRGIILNAVEYCVFPGVVNREAKQKVLEKIA 1590
            ....:..||..|     |.||:||||||:|:||||:.||.||:.:|...|.||...|.|:||::.
Zfish  1275 NWELESTSSAAS-----NTEYTGPKLYKEPSAKSNKYIIQNALAHCCLAGRVNEGQKNKILEEME 1334

  Fly  1591 RSEAKHFLVLFRDAGCQFRALYSYQPETDQVTKLYGTGPSQVEEVMFDKFFKYNSGGKCFSQVHT 1655
            ::||.:||:||||.|||||:||:|.||.:::.||.|.||..:...|.:..:||:|..|.||::..
Zfish  1335 KTEANNFLILFRDTGCQFRSLYTYYPEAEEMNKLAGIGPKTITPKMIENLYKYSSDKKQFSKIPA 1399

  Fly  1656 KHLTVTIDAFTIHNSLWQGKRVQLPSKK 1683
            |.::.::||.||::.|||.|: |..:||
Zfish  1400 KTMSASVDAITIYSHLWQNKK-QNTAKK 1426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatroninNP_001261051.1 CAMSAP_CH 189..272 CDD:288798 27/84 (32%)
CAMSAP_CC1 612..679 CDD:293700 24/100 (24%)
tolA_full 1271..>1391 CDD:274303 27/119 (23%)
CAMSAP_CKK 1549..1667 CDD:285846 55/117 (47%)
camsap2bXP_009297074.1 CAMSAP_CH 237..311 CDD:288798 25/74 (34%)
CAMSAP_CC1 702..758 CDD:293700 23/85 (27%)
GBP_C <1091..1161 CDD:303769 25/86 (29%)
coiled coil 1144..1159 CDD:293879 4/31 (13%)
CAMSAP_CKK 1292..1420 CDD:198119 61/127 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 42 1.000 Domainoid score I12426
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 396 1.000 Inparanoid score I1912
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D324856at33208
OrthoFinder 1 1.000 - - FOG0001093
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8286
SonicParanoid 1 1.000 - - X931
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.090

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