DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patronin and Camsap1

DIOPT Version :9

Sequence 1:NP_001261051.1 Gene:Patronin / 36978 FlyBaseID:FBgn0263197 Length:1689 Species:Drosophila melanogaster
Sequence 2:XP_006497961.1 Gene:Camsap1 / 227634 MGIID:3036242 Length:1603 Species:Mus musculus


Alignment Length:1939 Identity:423/1939 - (21%)
Similarity:715/1939 - (36%) Gaps:627/1939 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VETQEIRQARQRASVKWLLSKAFN-NRVPDNLKEPFYRDHENQERLKPQIIVELGNATLYCQTLA 66
            ::..:..:|:..|:::|:.:||:. :.:|::|::|||.|...||.:||.:|..|.::.|||:..:
Mouse    28 LDRYDAARAKIAANLQWICAKAYGLDNIPEDLRDPFYIDQYEQEHIKPPVIKLLLSSELYCRVCS 92

  Fly    67 NLYSDPNYQSM-NHWSIIQTLARKGVPVAESADMPITETVLIQTNPLRINAHMSVIESLMVLYAK 130
            .:.......:: .|.|:||.|:|||:.|.||.|.|:|:..|.|. |::::.||:::::||:.|..
Mouse    93 LILKGDQVATLQGHQSVIQALSRKGIYVMESDDTPVTDADLSQA-PIKMSGHMAMVDALMMAYTV 156

  Fly   131 EISSGDRVMAAIRRISGNNYQAPTGQSYEQALLGWISHACAALKKRIIKEVDAGLPD-------- 187
            |:.|.::|:|:::|.|..:.........|.|::.||:.  ..||.|.|.|.:..|..        
Mouse   157 EMISIEKVVASVKRFSTFSASKELPYDLEDAMVFWINK--VNLKMREITEKEVKLKQQPLESPAH 219

  Fly   188 ---------------------------DNGSRLQTPDIPPVRD-FQDLCDGICLALLISYYCPKV 224
                                       ::.|..|:|..|.:.| .:|..||..|..::.||||:.
Mouse   220 QKPGLEHAVMHCMLEPVDFARVVRYRREHLSARQSPYFPLLEDLMRDGSDGAALLAVVHYYCPEQ 284

  Fly   225 VPWTSVRINYLPAVEDSIHNILLVCNFSQKHLPYTVMHMTPEDVTYMRGSMKLNLVVLLTDLFNL 289
            :....:.:..:|::.||::||.|:..||.:|| ....::|.||:.|....:|.|::|.:.:||..
Mouse   285 MKLDDICLKEVPSMADSLYNIRLLREFSNEHL-NKCFYLTLEDMLYAPLVLKPNVMVFIAELFWW 348

  Fly   290 FE------IHP--------AKCVC-YPGMDGQVPHSN----SFGG---GLNRRSTPPNEYQTVQS 332
            ||      :.|        ||.|. .......||.||    ||.|   .::....||:.....  
Mouse   349 FENVKPDFVQPRDIQELKDAKTVLQQKSSRPPVPISNATKRSFLGSPAAMSPADQPPSTQPLA-- 411

  Fly   333 NNFDGNHAEAFVVHK------SRGITTLASMH-----SQQQQQLHQQQQHQQQYHQ--------- 377
               :|:|  .:.:|.      .:|.:|.:..|     .|:||::.|.::...|.|:         
Mouse   412 ---EGSH--RYHLHSEEPECLGKGASTFSPSHPLLPLRQKQQKVSQTEEIPDQRHRSNSLTRVDG 471

  Fly   378 ------------------QPL------------------------------------------QQ 382
                              ||.                                          |.
Mouse   472 QPRGAIGAWPDKKNRPVSQPTSFALHHAASCDVDPSSGDSVSLARSISKDSLASNIIHLTPQNQP 536

  Fly   383 HPSQ---------SQLQIQQQ-------------------------------------------- 394
            |||.         |.:.|:.:                                            
Mouse   537 HPSAGKSNGKSLLSNVNIEDEDEELVAIIRTDVSPPSPQMPRTSPQAPGLVASIRSPQRQADTLE 601

  Fly   395 --------EPLVPARLRQAKEKTNVESKADERGD----FVAAGRPSNWEQSR-RPSFAGRRSRRN 446
                    |||:||.||.|||| .:.:|.||||:    .:.|.|||...|.. |...:|....|:
Mouse   602 SKPDSFYLEPLMPAVLRPAKEK-QITTKEDERGEGRPRTIMAKRPSEGSQPMVRKKVSGGHGSRD 665

  Fly   447 SSSEDSQLTIENFGGSQDQLNTLGRYERDRERKLSNTSVGSYPVEPAVAVRSSIADARGTLQLGY 511
            .:...:.:....|..|.| |..:|....:...:....::|.:...|    :...||       |:
Mouse   666 LNRTFTPIPCSEFAASID-LAEVGPQSAEATGEGQPLALGRFDTLP----QGQAAD-------GF 718

  Fly   512 DTDSGSEKQD-------------RETEKYSMRRQVSVDNVPTVSSHNLSNAGSPLPVARHKQHSS 563
            ....|..::|             .::|.:::.||.|..:|..|........|...||...:....
Mouse   719 FLHVGRAEEDEGRWYVGSQSPSSHDSEPWTILRQDSDSDVVDVEDTEQDFIGEDHPVVIPRYAGE 783

  Fly   564 DKDYSSNSGMTPDAYNDSRSTSGYDPESTPVRKSSTSSMPASPAAWQLDVGDDDMRSLENASKLS 628
            ::.......|....:.|....||   .|:|. .|:||.:             ..|.....:.|::
Mouse   784 EESAKLQEDMKVKEHEDKDDASG---RSSPC-LSTTSQL-------------SSMSMASGSVKMT 831

  Fly   629 TIRMKLEEKRRRIEQDKRKIEMALLRHQEKEDLESCP-DVMKWETMSNESKRTPDMDPVDLDKYQ 692
            :.   .|.|.:|:...:.|...:..:....:..|||| .:..|.....:|......||..|  ..
Mouse   832 SF---AERKLQRLNSCETKSSTSSSQKTTPDASESCPAPLTTWRQKREQSPGRHSKDPASL--LA 891

  Fly   693 QSIAIMNMNLQDIQQDIHRLATQQSQMQAQHLQAQQLMQAQQIA--NMLNQQQTYGSQQHLADHH 755
            ..:..::|.|::.::.|.   .|:.:|:|  |.|:|.::..:.|  :::.:.:..|:.|.|...|
Mouse   892 SELVQLHMQLEEKRRAIE---AQKKKMEA--LSARQRLKLGKAAFLHVVKKGKADGAPQPLRPEH 951

  Fly   756 YQQQRPMQ--QSFGSSPHLPQAYNAPVSAYSSRPPSRDPYQQQLHHQQQQPMPMPQPMQYVNEHG 818
            :.::....  :.........:.:                    |..::|:.:...|.:.:|..| 
Mouse   952 FTKEFTQHNGEDLDDGTCKTEGF--------------------LVKEEQRDLSDAQDVAFVQLH- 995

  Fly   819 QYMSPPQPAHYMPQQAQQPQSIYSDNGAAYNHSNHSPYGGTPQYRSSVVYDDYGQ-PTNHFYLHE 882
               .|..||                  |.::...|.      ...::::.|..|: ..|...|  
Mouse   996 ---KPRDPA------------------ALHDGEKHR------MISTALLEDSVGEVDVNECDL-- 1031

  Fly   883 SSPQPQAHQHPQRRTWAHSAAAAAYEQQQQIQPSLVDVNAWQTQQHQKQKQTWMNRPPSSAGAPS 947
                               :.....|....:|.:::.::       |:|:|..|..|.    .|:
Mouse  1032 -------------------SIEKLNETISTLQQAILKIS-------QQQEQLLMKSPT----VPT 1066

  Fly   948 PGSFMLHQNGGGGGGGGGGGELQHLFQVQASPQHGQRQVSGSNGVQRQQSLTNLRDNRSPKAPQN 1012
            ||:                                      .|..|.|:.          |||.:
Mouse  1067 PGT--------------------------------------KNNCQDQKI----------KAPVH 1083

  Fly  1013 MGMPM---GMPMQQEDMMAPQSICFIGDEEDVDELERNIIESMQSTHISDFVHQQQQQHQHQQQL 1074
            ...|:   |:|                                              .|:...:|
Mouse  1084 FVEPLSPTGVP----------------------------------------------GHRKPPRL 1102

  Fly  1075 QQQQRLQGHSGRGSSSEDYDSGEMISNKLNITSGNLTYRIPSPS----------RPSIQANSFQD 1129
                      |:|.:|......|:...| :...|....:.|:||          .||....|..|
Mouse  1103 ----------GQGRNSRSGRPAELKVPK-DRQQGCSRSKTPTPSVETLPQSRSLPPSTHPRSPSD 1156

  Fly  1130 PRAMAAASGGEDQPPEKGFYISF--DDEQPKRPKPPLRAKRSPKKESPPGSRDSVDNQATLKRES 1192
            |       |||  .|||..:.|:  .||                           .|..|.   .
Mouse  1157 P-------GGE--LPEKCLFDSYRLHDE---------------------------SNHRTF---V 1182

  Fly  1193 LSHLHNNNNIGFGNDDVNSKPVTRHSIHGLNNSNSVKSPG----NATYNKYTD-EPPIQLRQLAV 1252
            ||...:.|.:   ::.||.|       .||:  .|||..|    ..|..::|. |.|::.:...:
Mouse  1183 LSSCKDANIV---SEQVNFK-------EGLD--TSVKEAGLSSSTITGKEHTPVEEPLRSKASLI 1235

  Fly  1253 SGAMSPTSNERHHLDDVSNQSPQQTQQPMSPTRLQQSSNNAEAAKNKALV-IGADSTN------- 1309
            ...:|.                           |:....:.|...:::.| :|.||..       
Mouse  1236 EVDLSD---------------------------LKAPDEDGEVVGHESSVELGGDSDQKPGVGFF 1273

  Fly  1310 -LDPESVDEMERRKEKIMLLSLQRRQQQEEAKARK---EIEASQKREKEREKEEERARKKEEQMA 1370
             .|.:..::...:|....||..||:  .|||:|||   |.|...||::.|.|.||...:|||:.|
Mouse  1274 FKDEQKAEDELAKKRAAFLLKQQRK--AEEARARKQQLEAEVELKRDEARRKAEEDRLRKEEEKA 1336

  Fly  1371 RRAAILEQHRLKKAIEEAEREGKTLDRPDLHVKLQSHSSTSTTPRLRQQRTTRPRPKTIHVDDAS 1435
            ||..|.:::..:|..:..|.:|  |.:|                   :.:..:||||::|.::  
Mouse  1337 RRELIKQEYLRRKQQQALEEQG--LGKP-------------------KSKPKKPRPKSVHREE-- 1378

  Fly  1436 VDISEASSISSRGKKGSSS--NLTGYGQLSSNSMKRDYYRGSQDSLTVKDSGLGRATPPRRAPSP 1498
                   |.|..|.|.||:  ||:.....||.|:       :..:.|..:|.....||..|..| 
Mouse  1379 -------SYSDSGTKCSSTPDNLSQTHSGSSLSL-------ASAATTEPESVYSGGTPSHRVES- 1428

  Fly  1499 GMGMGASGRHMPSPSGPGSLPPGLISKRRGFDDGSSDFSLTPNLNMEYSGPKLYKQPAAKSNRGI 1563
               :.|......:||.         |..|.::..|:..||..  ..||:||||:|:|::|||:.|
Mouse  1429 ---LEALPILSRNPSR---------STDRDWETASAASSLAS--VAEYTGPKLFKEPSSKSNKPI 1479

  Fly  1564 ILNAVEYCVFPGVVNREAKQKVLEKIARSEAKHFLVLFRDAGCQFRALYSYQPETDQVTKLYGTG 1628
            |.||:.:|...|.||...|..:||::.:.:|.|:::|||||||||||||.|||:|:::.||.|||
Mouse  1480 IHNAISHCCLAGKVNEPHKNSILEELEKCDANHYIILFRDAGCQFRALYCYQPDTEEIYKLTGTG 1544

  Fly  1629 PSQVEEVMFDKFFKYNSGGKCFSQVHTKHLTVTIDAFTIHNSLWQGKRVQLPSK 1682
            |..:.:.|.||.:||:|..|.|:.:..|.::|::||.||||.|||.||..:|.|
Mouse  1545 PKSITKKMIDKLYKYSSDRKQFNLIPAKTMSVSVDALTIHNHLWQPKRPTVPKK 1598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatroninNP_001261051.1 CAMSAP_CH 189..272 CDD:288798 27/83 (33%)
CAMSAP_CC1 612..679 CDD:293700 12/67 (18%)
tolA_full 1271..>1391 CDD:274303 35/131 (27%)
CAMSAP_CKK 1549..1667 CDD:285846 56/117 (48%)
Camsap1XP_006497961.1 CAMSAP_CH 248..331 CDD:314792 27/83 (33%)
CAMSAP_CC1 879..937 CDD:374981 13/64 (20%)
ARGLU <1277..1354 CDD:373772 27/78 (35%)
CAMSAP_CKK 1464..1592 CDD:198119 64/127 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167840848
Domainoid 1 1.000 133 1.000 Domainoid score I5033
eggNOG 1 0.900 - - E1_KOG3654
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 385 1.000 Inparanoid score I2013
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG47141
OrthoDB 1 1.010 - - D324856at33208
OrthoFinder 1 1.000 - - FOG0001093
OrthoInspector 1 1.000 - - otm43317
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21595
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3368
SonicParanoid 1 1.000 - - X931
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.990

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