Sequence 1: | NP_001261051.1 | Gene: | Patronin / 36978 | FlyBaseID: | FBgn0263197 | Length: | 1689 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001294846.1 | Gene: | ptrn-1 / 181743 | WormBaseID: | WBGene00004121 | Length: | 1112 | Species: | Caenorhabditis elegans |
Alignment Length: | 1719 | Identity: | 340/1719 - (19%) |
---|---|---|---|
Similarity: | 565/1719 - (32%) | Gaps: | 672/1719 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 VETQEIRQARQRASVKWLLSKAFNNR--VPDNLKEPFYRDHENQERLKPQIIVELGNATLYCQTL 65
Fly 66 ANLYSDPNYQSMNHWSIIQTLARKGVPVAESADMPITETVLIQTNPLRINAHMSVIESLMVLYAK 130
Fly 131 EISSGDRVMAAIRRISGNNYQAPTGQSYE--QALLGWISHACAALKKRIIKEVDAGLPDDNGSRL 193
Fly 194 QTPDIPPVRD-FQDLCDGICLALLISYYCPKVVPWTSVRINYLPAVEDSIHNILLVCNFSQKHLP 257
Fly 258 YTVMHMTPEDVTYMRGSMKLNLVVLLTDLFNLFEIHPAKCVCYPGMDGQVPHSNSFGGGLNRRST 322
Fly 323 PPNEYQTVQSNNFDGNHAEAFVVHKSRGITTLASMHSQQQQQLHQQQQHQQQYHQQPLQQH---P 384
Fly 385 SQSQLQIQQQEPLVPARLRQAKEKTNVESKADERGDFVAAGRPSNWEQSRRPSFAGRRSRRNSSS 449
Fly 450 EDSQLTIENFGGSQDQLNTLGRYERDRERKLSNTSVGSYPVEPAVAVRSSIADARGTLQLGYDTD 514
Fly 515 SGSEKQDRETEKYSMRRQVSVDNVPTVSSHNLSNAGSPLPVARHKQHSSDKDYSSNSGMTPDAYN 579
Fly 580 DSRSTSGYDPESTPVRKSSTSSMPASPAAWQLDVGDDDMRSLENASKLSTIRMKLEEKRRRIEQD 644
Fly 645 KRKIEMALLRHQEKEDLESCPDVMKWETMSNESKRTPDMDPVDLDKYQQSIAIMNMNLQDIQQDI 709
Fly 710 HRLATQQSQMQAQHLQAQQLMQAQQIANMLNQQQTYGSQQHLADHHYQQQRPMQQSFGSSPHLPQ 774
Fly 775 AYNAPVSAYSSRPPSRDPYQQ--QLHHQQQQPMPMPQPMQYVNEHGQYMSPPQPAH--YMPQQAQ 835
Fly 836 QPQSIYSDNGAAYNHSNHSPYGGTPQYRSSVVYDDYGQPTNHFYLHESSPQPQAHQHPQRRTWAH 900
Fly 901 SAAAAAYEQQQQIQPSLVDVNAWQTQQHQKQKQTWMNRPPSSAGAPSP-GSFMLH-------QNG 957
Fly 958 ------GGGGGGGGGGELQHLFQVQASP-QHGQRQVSGSNGVQRQQSLTNLRDNRSPKAPQNMGM 1015
Fly 1016 PMGMPMQQEDMMAPQSICFIGDEEDVDELERNIIESMQSTHISDFVHQQQQQHQHQQQLQQQQRL 1080
Fly 1081 QGHSGRGSSSEDYDSGEMISNKLNITSGNLTYRIPSPSRPSIQANSFQDPRAMAAASGGEDQPPE 1145
Fly 1146 KGFYISFDDEQPKRPKPPLRAKRSPKKESPPGSRDSVDNQATLKRESLSHLHNNNNIGFGNDDVN 1210
Fly 1211 SKP---VTRHSIHGLNNSNSVKSPGNATYNKYTDEPPIQLRQLAVSGAMSPTSNERHHLDDVSNQ 1272
Fly 1273 SPQQT--QQPMSPTRLQQSSNNAEAAKNKALVIGADSTNLDPESVDEMERRKEKIMLLSLQRRQQ 1335
Fly 1336 QEEAKA-RKEIEASQKREKEREKEEERARKKEEQMARRAAILEQHRLKKAIEE--AEREGKTLDR 1397
Fly 1398 -----PDLHVKLQ----SHSSTSTTPRLRQQRTTRPRPKTIHVDDASVDISEASSISSRGKKGSS 1453
Fly 1454 SNLTGYGQLSSNSMKRDYYRGSQDSLTVKDSGLGRATPPRRAPSPGMGMGASGRHMPSPSGPGSL 1518
Fly 1519 PPGLISKRRGFDDGSSDFSLTPNLNMEYSGPKLYKQPAAKSNRGIILNAVEYCVFPGVVNREAKQ 1583
Fly 1584 KVLEKIARSEAKHFLVLFRDAGCQFRALYSYQPETDQVTKLYGTGPSQVEEVMFDKFFKYNSGGK 1648
Fly 1649 CFSQVHTKHLTVTIDAFTIHNSLWQGKRV 1677 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Patronin | NP_001261051.1 | CAMSAP_CH | 189..272 | CDD:288798 | 24/83 (29%) |
CAMSAP_CC1 | 612..679 | CDD:293700 | 11/66 (17%) | ||
tolA_full | 1271..>1391 | CDD:274303 | 32/124 (26%) | ||
CAMSAP_CKK | 1549..1667 | CDD:285846 | 55/117 (47%) | ||
ptrn-1 | NP_001294846.1 | CAMSAP_CH | 188..270 | CDD:288798 | 26/93 (28%) |
RILP-like | <854..938 | CDD:304877 | 27/95 (28%) | ||
CAMSAP_CKK | 972..1100 | CDD:198119 | 60/185 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160161698 | |
Domainoid | 1 | 1.000 | 124 | 1.000 | Domainoid score | I3441 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 299 | 1.000 | Inparanoid score | I1637 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001093 | |
OrthoInspector | 1 | 1.000 | - | - | oto17745 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR21595 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X931 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.080 |