DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patronin and camsap1

DIOPT Version :10

Sequence 1:NP_001261051.1 Gene:Patronin / 36978 FlyBaseID:FBgn0263197 Length:1689 Species:Drosophila melanogaster
Sequence 2:XP_031746583.1 Gene:camsap1 / 100488075 XenbaseID:XB-GENE-940439 Length:1590 Species:Xenopus tropicalis


Alignment Length:228 Identity:45/228 - (19%)
Similarity:74/228 - (32%) Gaps:80/228 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LEKQEEFDQMDLEALEEASNHDDEPEDDIDLEALDVPVGVRCAKFTDTEMRKSYKYECEWGKCK- 129
            |||::          :||..|.||.:::||             :..:....:..|.|.::.|.: 
 Frog    15 LEKEQ----------QEAIEHIDEVQNEID-------------RLNEQASEEILKVEQKYNKLRQ 56

  Fly   130 --FMSGTD----------RKYFLHVESHAELALE-TEAGKYTCRWDLCEY-STEDGYEFVGHVHY 180
              |...::          ..:..|.:..|.|..| .||..|..|.::.|: ..:.||....:...
 Frog    57 PFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDE 121

  Fly   181 HAYHTKLKVHGASLHLLLKLPNCNNDSRTRNTITNRPVTFQCEW-------NECSDRFNKALH-- 236
            :.|... ||.....||     |.:.|..:::|        :.:|       ...|...|||..  
 Frog   122 NPYFEN-KVLSKEFHL-----NESGDPSSKST--------EIKWKSGKDLTKRSSQTQNKASRKR 172

  Fly   237 -------FFHHVKGHI------------DDMWP 250
                   ||.....|.            ||:||
 Frog   173 QHEEPESFFTWFTDHSDAGADELGEVIKDDIWP 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatroninNP_001261051.1 CAMSAP_CH 189..272 CDD:432229 18/90 (20%)
CAMSAP_CC1 612..679 CDD:465344
PRK10263 <741..>898 CDD:236669
tolA_full 1271..>1391 CDD:274303
CAMSAP_CKK 1548..1676 CDD:198119
camsap1XP_031746583.1 CAMSAP_CH 241..324 CDD:432229
CAMSAP_CC1 860..918 CDD:465344
ARGLU <1262..1339 CDD:405931
CAMSAP_CKK 1451..1579 CDD:198119
Blue background indicates that the domain is not in the aligned region.

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