DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patronin and camsap1

DIOPT Version :9

Sequence 1:NP_001261051.1 Gene:Patronin / 36978 FlyBaseID:FBgn0263197 Length:1689 Species:Drosophila melanogaster
Sequence 2:XP_031746583.1 Gene:camsap1 / 100488075 XenbaseID:XB-GENE-940439 Length:1590 Species:Xenopus tropicalis


Alignment Length:1979 Identity:430/1979 - (21%)
Similarity:704/1979 - (35%) Gaps:730/1979 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QARQRASVKWLLSKAFN-NRVPDNLKEPFYRDHENQERLKPQIIVELGNATLYCQTLANLYSDPN 73
            :|:..|:::|:.:||:. :.||:.||:|||.|...||.:||.:|..|.::.|||:..:.:.....
 Frog    37 RAKIAANLQWICAKAYGIDNVPEELKDPFYTDQYEQEHIKPPVIKLLLSSELYCRVCSLILKGDQ 101

  Fly    74 YQSM-NHWSIIQTLARKGVPVAESADMPITETVLIQTNPLRINAHMSVIESLMVLYAKEISSGDR 137
            ..:: .|..:||.|::||:.|.||.:.|::::.| ..:|::::||||:|::||:.|..|:.|.::
 Frog   102 VAALQGHQPVIQALSQKGIYVMESDEAPVSDSDL-SCSPIKMSAHMSMIDALMMAYTVEMISIEK 165

  Fly   138 VMAAIRRISGNNYQAPTGQSYEQALLGWISHACAALKKRIIKEVDAGLPD--------------- 187
            |:|:::|.|..:.........|.|::.||:.  ..||.|.|.|.:..:..               
 Frog   166 VVASVKRFSTFSASKELPYDLEDAMVFWINK--VNLKMREILEREHRIKQQVIESPSHPKSPSKW 228

  Fly   188 -----------DNGSRLQTPDIPPVRD-FQDLCDGICLALLISYYCPKVVPWTSVRINYLPAVED 240
                       |:.|....|..|.:.| .:|:.||..|..:|.:|||:.:....:.:..:.::.|
 Frog   229 YWKLVPIRYRRDHPSNRHLPYFPILEDLMKDISDGAALLTIIHFYCPEQMKLDDICLKEVTSIAD 293

  Fly   241 SIHNILLVCNFSQKHLPYTVMHMTPEDVTYMRGSMKLNLVVLLTDLFNLFE------IHP----- 294
            |::||.|:..||.::| .....:|.||:.|....:|.|::|.:.:||..||      :.|     
 Frog   294 SLYNIQLLKEFSNEYL-NKCFFLTLEDMLYSPLVLKPNVMVFIAELFWWFENVKPDFVQPRDTQE 357

  Fly   295 ---AKCVCYP-GMDGQVPHSNSFGGGLNRRS---TPPNE---YQTVQSNNFDGNHAEAFVVHKSR 349
               ||....| ....|||.||:     .:||   :||:.   .....|::...|:.:.......:
 Frog   358 LKEAKVATQPKSSRPQVPISNA-----TKRSFLASPPSTGDCQAAAASDSCSRNYLQPEDAENGK 417

  Fly   350 GITTLASMH-----SQQQQQLHQQQQ---HQQQYH------------------------QQPLQQ 382
            |.|..:..|     .|:||:..|.::   |:.:.:                        .||...
 Frog   418 GCTVFSPSHPLLPLRQKQQKSVQPEESPNHRDRANSLTRADGQPMASIIAWPEKKLRPLSQPFAF 482

  Fly   383 H---------------------------------------------------------------- 383
            |                                                                
 Frog   483 HHGADDVDATSGDSISLARSISKDSLASNIISATPKHQTFPTPMNVGSKSLLGNVDIEDDEEELV 547

  Fly   384 ----------PSQSQLQIQQQ--------------------------EPLVPARLRQAKEKTNVE 412
                      |...:||....                          |||:||.|:.||||..| 
 Frog   548 AFIRSDDTSCPGDLELQSVSSRASSQMSATRPRRPGDLESKPDSFFLEPLMPAVLKPAKEKQMV- 611

  Fly   413 SKADERGDFVAAGRPSNWEQSRRPSFAGRRSRRNSSSED------------------------SQ 453
            .|.:|.|:....|..|..:.....||:.::...|.:..|                        :|
 Frog   612 PKREEYGEGKQKGFSSKRQNEGNQSFSRKKIINNHTGHDLNRTFTPLSSLESACVTAPLRTDPAQ 676

  Fly   454 LTIENFGGSQDQLNT--------LGRY------ERDRERKLSNTSVGSYPVEPAVAVRSSIADAR 504
            |:|||..|:...|.|        :|.:      :.:.|.|   .||||..:|..   |.|  |..
 Frog   677 LSIENGNGTFRPLATSSVEPNEPVGGFFLHDINDDEVEEK---PSVGSLMIEDP---RKS--DTT 733

  Fly   505 GT-------LQLG-----------YDTDSGSEKQDRETEKYSMRRQVSVDNVPTVSSHNLSNAGS 551
            .|       |.:|           :....|.|:..:..|...::.....|:....||..||..  
 Frog   734 WTVLPDSEHLDIGEREQEVVVARAFGKHIGEEESAKLQEDMKVKEHDDKDDASGRSSPCLSTI-- 796

  Fly   552 PLPVARHKQHSSDKDYSSNSGMTPDAYNDSRSTSGYDPESTPVRKSSTSS-----------MPAS 605
                   .|.||....|.:..||..|....:..:.|:      .||||||           .|..
 Frog   797 -------SQISSASMASGSIRMTSFAERKFQRLNSYE------TKSSTSSSQKTTPDGSECCPLP 848

  Fly   606 PAAWQLDVGDDDMRSLEN-----ASKLSTIRMKLEEKRRRIEQDKRKIE------------MALL 653
            ...|:........|..::     ||:|..:.|:||||||.||..|:|:|            .|.|
 Frog   849 LTTWKQRREQSPGRQNKDHANVLASELVQLHMQLEEKRRAIEAQKKKMESLSARQRLKLGKAAFL 913

  Fly   654 RHQEKEDLESCPDVMK-WETMSNESKRTP-DMDPVD----LDKYQQSIAIMNMNLQD-------- 704
            ...:|...::.|..:| ..::.:.:||.| |:|.|.    :::|.::|...::.:|:        
 Frog   914 HVVKKGKPDTVPQPVKPGHSLKDYTKRVPEDIDAVSVNAKVEQYLETIEPGDLKVQEAFADPKQK 978

  Fly   705 ----IQQDIHRL--------ATQQSQMQAQHLQAQQLMQA----QQIANMLNQQQTYGSQQHLAD 753
                ::.||..|        |..:..:....|..::|.:.    ||....::|||          
 Frog   979 DPASLEADICNLIASSTPDDADSEIDVNECDLSIEKLNETISTLQQAILKISQQQ---------- 1033

  Fly   754 HHYQQQRPMQQSFGSSPHLPQAYNAPVSAYSSRPPSRDPYQQQLHHQQQQPMPMPQPMQYVNEHG 818
                               .....||..|..|.|            ...|...:...:|:|    
 Frog  1034 -------------------EMLMKAPAMAVPSLP------------NNGQEHKLKPSVQFV---- 1063

  Fly   819 QYMSPPQPAHYMPQQAQQPQSIYSDNGAAYNHSNHSPYGGTPQYRSSVVYDDYGQPTNHFYLHES 883
            :.:|||                                 |.|..|.:   ..:||..|       
 Frog  1064 EPISPP---------------------------------GVPVARKT---PRFGQGRN------- 1085

  Fly   884 SPQPQAHQHPQRRTWAHSAAAAAYEQQQQIQPSLVDVNAWQTQQHQKQKQTWMNRPPSSAGAPS- 947
               |::.:.|:::|    |...|....:.|.|:    |:.:|..|.|..|     ||.|...|: 
 Frog  1086 ---PRSLRIPEQKT----AKEKALSSSRVITPT----NSIETVPHLKSVQ-----PPKSPNLPAE 1134

  Fly   948 -PGSFMLHQNGGGGGGGGGGGELQHLFQVQASPQHGQRQVSGSNGVQRQQSLTNLRDNRSPKAPQ 1011
             |.:.::.:.|..               .|..|..|..::...|. ||...|:..:|        
 Frog  1135 EPPADIVPEQGSA---------------YQDKPTTGGFRLHEDNN-QRTFVLSASKD-------- 1175

  Fly  1012 NMGMPMGMPMQQEDMMAPQSICFIGDEEDVDELERNIIESMQSTHISDFVHQQQQQHQHQQQLQQ 1076
                                              .|||              .:|.|:.      
 Frog  1176 ----------------------------------ANII--------------SEQMHRE------ 1186

  Fly  1077 QQRLQGHSGRGSSSEDYDSGEMISNKLNITSGNLTYRIPSPSRPSIQANSFQDPRAMAAASGGED 1141
                                         ..|:|  |:...|.|.              :||.|:
 Frog  1187 -----------------------------AVGSL--RVAGGSAPE--------------SSGKEN 1206

  Fly  1142 QPPEKGFYISFDDEQPKRPKPPLRAKRSPKKESPPGSRDSVDNQATLKRESLSHLHNNNNIGFGN 1206
            .|.         |||.|                         |:::|....||.|          
 Frog  1207 VPV---------DEQNK-------------------------NKSSLIEVDLSDL---------- 1227

  Fly  1207 DDVNSKPVTRHSIHGLNNSNSVKSPGNATYNKYTDEPPIQLRQLAVSGAMSPTSNERHHLDDVSN 1271
                                           |.|||                ...|..|      
 Frog  1228 -------------------------------KETDE----------------EGEETDH------ 1239

  Fly  1272 QSPQQTQQPMSPTRLQQSSNNAEAAKNKALVIGADSTNLDPESVDEMERRKEKIMLLSLQRRQQQ 1336
              |::|:..:|.   .|.|......|:            :.::.||:.:::...:   ::::::.
 Frog  1240 --PEKTKDIISD---DQKSGLGFFFKD------------EQKAEDELAKKRAAFL---MKQQRKA 1284

  Fly  1337 EEAKARK---EIEASQKREKEREKEEERARKKEEQMARRAAILEQHRLKKAIEEAEREGKTLDRP 1398
            |||:.||   |.|..|||::.|.|.||...:|:|:.|||..|.:::..:|..:..|.:|  |.||
 Frog  1285 EEARIRKQQLEAEVEQKRDEARRKAEEDRIRKDEEKARRELIKQEYLRRKQQQILEEQG--LGRP 1347

  Fly  1399 DLHVKLQSHSSTSTTPRLRQQRTTRPRPKTIHVDDASVDISEASSISSRGKKGSSS--NLTGYGQ 1461
                          .|:.:.::|   |||::|.::         |.|..|.|.||:  ||:....
 Frog  1348 --------------KPKPKPRKT---RPKSVHREE---------SYSDSGTKYSSTPDNLSSAQS 1386

  Fly  1462 LSSNSMKRDYYRGSQDSLTVKDSGLGRATPPRRAPSPGMGMGASGRHMPSPSGPGSLPPGLISKR 1526
            .||.|:       :..:.|..:|.....||..|..... .:...|||...            :..
 Frog  1387 GSSLSL-------ASGATTEAESVHSGGTPSHRVDCVD-SLSGMGRHQSR------------NAE 1431

  Fly  1527 RGFDDGSSDFSLTPNLNMEYSGPKLYKQPAAKSNRGIILNAVEYCVFPGVVNREAKQKVLEKIAR 1591
            |.:::.|:..|:..  ..|||||||||:|::|||:.||.||:.:|...|.||...|...||::.:
 Frog  1432 RDWENASTASSIAS--VAEYSGPKLYKEPSSKSNKPIIHNAISHCCLAGKVNETVKNSTLEELEK 1494

  Fly  1592 SEAKHFLVLFRDAGCQFRALYSYQPETDQVTKLYGTGPSQVEEVMFDKFFKYNSGGKCFSQVHTK 1656
            .::.|:::|||||||||||||||.|:|:::.||.||||..:.:.|.||.:||:|..|.|:.:..|
 Frog  1495 CDSNHYIILFRDAGCQFRALYSYYPDTEEICKLMGTGPKNITKKMIDKLYKYSSDRKQFTVIPAK 1559

  Fly  1657 HLTVTIDAFTIHNSLWQGKRVQLPSKKDM 1685
            .::.::||.||||.|||.||..||.|..:
 Frog  1560 TMSASVDALTIHNHLWQAKRPALPKKNPL 1588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatroninNP_001261051.1 CAMSAP_CH 189..272 CDD:288798 24/83 (29%)
CAMSAP_CC1 612..679 CDD:293700 21/84 (25%)
tolA_full 1271..>1391 CDD:274303 30/122 (25%)
CAMSAP_CKK 1549..1667 CDD:285846 55/117 (47%)
camsap1XP_031746583.1 CAMSAP_CH 241..324 CDD:314792 24/83 (29%)
CAMSAP_CC1 860..918 CDD:407239 18/57 (32%)
ARGLU <1262..1339 CDD:405931 23/79 (29%)
CAMSAP_CKK 1452..1570 CDD:400841 55/117 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I5008
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 371 1.000 Inparanoid score I2078
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D324856at33208
OrthoFinder 1 1.000 - - FOG0001093
OrthoInspector 1 1.000 - - otm48466
Panther 1 1.100 - - O PTHR21595
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X931
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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