DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4866 and IMP3

DIOPT Version :10

Sequence 1:NP_611224.1 Gene:CG4866 / 36976 FlyBaseID:FBgn0034232 Length:181 Species:Drosophila melanogaster
Sequence 2:NP_060755.1 Gene:IMP3 / 55272 HGNCID:14497 Length:184 Species:Homo sapiens


Alignment Length:182 Identity:104/182 - (57%)
Similarity:143/182 - (78%) Gaps:1/182 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVRKLKFHEQKLLKKVDFITWKV-DNGGKENKILRRFHIQKREDYTKYNKLSREIRELAERIAKL 64
            ||||||||||||||:|||:.|:| |:...|.::|||:.:|:|||||:||:|||.:||||.|:..|
Human     1 MVRKLKFHEQKLLKQVDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDL 65

  Fly    65 DASEPFKTEATTMLLNKLHAMGVSNDQLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDL 129
            ...:.|:..|:..||:||:|:|:...:.:||....::||.|||||||.:::||||::||:||...
Human    66 PERDQFRVRASAALLDKLYALGLVPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAF 130

  Fly   130 IEHGHVRVGPEMIKDPAFLVSRNLEDFVTWVDGSKIKEHVLRYNDMRDDFQM 181
            :|.|||||||:::.||||||:|::||||||||.||||.|||.||:.||||.:
Human   131 VEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIKRHVLEYNEERDDFDL 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4866NP_611224.1 Ribosomal_S4 4..96 CDD:459696 47/92 (51%)
uS4_arch 28..166 CDD:273397 73/137 (53%)
IMP3NP_060755.1 uS4_arch 30..167 CDD:273397 73/136 (54%)

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