DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4866 and RpS9

DIOPT Version :10

Sequence 1:NP_611224.1 Gene:CG4866 / 36976 FlyBaseID:FBgn0034232 Length:181 Species:Drosophila melanogaster
Sequence 2:NP_524004.2 Gene:RpS9 / 39108 FlyBaseID:FBgn0010408 Length:195 Species:Drosophila melanogaster


Alignment Length:123 Identity:29/123 - (23%)
Similarity:61/123 - (49%) Gaps:1/123 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KENKILRRFHIQKREDYTKYNKLSREIRELAERIAKLDASEPFKTEATTMLLNKLHAMGVSND-Q 91
            :|.||:..:.::.:.:..:......:||:.|..:..||..:..:......||.:|..:||.:: :
  Fly    28 QELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESR 92

  Fly    92 LTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVRVGPEMIKDPAFLV 149
            :.|:....:....|..|||...:.||.:::.:..|..||...|:||..:::..|:|:|
  Fly    93 MKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVV 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4866NP_611224.1 Ribosomal_S4 4..96 CDD:459696 14/68 (21%)
uS4_arch 28..166 CDD:273397 29/123 (24%)
RpS9NP_524004.2 PTZ00155 4..182 CDD:185484 29/123 (24%)

Return to query results.
Submit another query.