DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4866 and rps-9

DIOPT Version :10

Sequence 1:NP_611224.1 Gene:CG4866 / 36976 FlyBaseID:FBgn0034232 Length:181 Species:Drosophila melanogaster
Sequence 2:NP_496384.1 Gene:rps-9 / 174699 WormBaseID:WBGene00004478 Length:189 Species:Caenorhabditis elegans


Alignment Length:182 Identity:39/182 - (21%)
Similarity:86/182 - (47%) Gaps:14/182 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KLKFHEQKLLK--KVDFITWKVDNGGKENKILRRFHIQKREDYTKYNKLSREIRELAERIAKLDA 66
            :||..:.|:.|  :..|...::|   :|.|::..|.::.:.:..:......::|:.|..:..|:.
 Worm     3 RLKTVQSKVTKSPRRPFEKERLD---QELKLIGTFGLKNKREVWRVKYTLAKVRKAARELLTLED 64

  Fly    67 SEPFKTEATTMLLNKLHAMGVSND-QLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLI 130
            .:|.:......||.:|..:||.:: ::.|:....:....|..|||...:.||.:::.:..|..||
 Worm    65 KDPKRLFEGNALLRRLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILI 129

  Fly   131 EHGHVRVGPEMIKDPAFLVSRNLEDFVTWVDGS--------KIKEHVLRYND 174
            :..|:||..:::..|:|:|..:.:..:.:...|        ::|...||..|
 Worm   130 KQHHIRVRRQVVDVPSFIVRLDSQKHIDFSLQSPYGGGRPGRVKRRTLRKGD 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4866NP_611224.1 Ribosomal_S4 4..96 CDD:459696 19/94 (20%)
uS4_arch 28..166 CDD:273397 29/146 (20%)
rps-9NP_496384.1 PTZ00155 1..179 CDD:185484 37/178 (21%)

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