DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4866 and Imp3

DIOPT Version :10

Sequence 1:NP_611224.1 Gene:CG4866 / 36976 FlyBaseID:FBgn0034232 Length:181 Species:Drosophila melanogaster
Sequence 2:NP_598737.1 Gene:Imp3 / 102462 MGIID:1916119 Length:184 Species:Mus musculus


Alignment Length:182 Identity:106/182 - (58%)
Similarity:144/182 - (79%) Gaps:1/182 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVRKLKFHEQKLLKKVDFITWKV-DNGGKENKILRRFHIQKREDYTKYNKLSREIRELAERIAKL 64
            ||||||||||||||:|||:.|:| |:...|.::|||:.:|:||:||:||:|||.:||||.|:..|
Mouse     1 MVRKLKFHEQKLLKQVDFLNWEVTDHNLHELRVLRRYRLQRREEYTRYNQLSRAVRELARRLRDL 65

  Fly    65 DASEPFKTEATTMLLNKLHAMGVSNDQLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDL 129
            ...:||:..|:..||:||:|||:...:.:||....:|||.|||||||.:::||||::||:||...
Mouse    66 PERDPFRVRASAALLDKLYAMGLVPTRGSLELCDSVSASSFCRRRLPTLLLKLRMAQHLQAAVAF 130

  Fly   130 IEHGHVRVGPEMIKDPAFLVSRNLEDFVTWVDGSKIKEHVLRYNDMRDDFQM 181
            :|.|||||||:::.||||||:|::||||||||.||||.|||.||:.||||.:
Mouse   131 VEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIKRHVLEYNEERDDFDL 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4866NP_611224.1 Ribosomal_S4 4..96 CDD:459696 48/92 (52%)
uS4_arch 28..166 CDD:273397 75/137 (55%)
Imp3NP_598737.1 uS4_arch 30..167 CDD:273397 75/136 (55%)

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