DRSC/TRiP Functional Genomics Resources

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Protein Alignment APC10 and DOC1

DIOPT Version :10

Sequence 1:NP_611223.4 Gene:APC10 / 36975 FlyBaseID:FBgn0034231 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_011274.2 Gene:DOC1 / 852611 SGDID:S000003209 Length:250 Species:Saccharomyces cerevisiae


Alignment Length:169 Identity:53/169 - (31%)
Similarity:90/169 - (53%) Gaps:6/169 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 NPPPSSEEDPLAE--ERLGFVREVGAQ--AVWSLSSCKPGFGVERLRDNIMDTYWQSDGQLPHLV 72
            ||.|.:.:....:  |.|...|.:...  |:|..||.|.|..|:...|:..||:|||||..||.:
Yeast    59 NPTPENLQHMFHQGIEILDSARMINVTHLALWKPSSFKLGNPVDFALDDNYDTFWQSDGGQPHQL 123

  Fly    73 NIQFHKRTNISQIYIYTDYKLDESYTPSRISIRSGTNFNDLQELQVMDLTEPTGWVQIPIKDG-- 135
            :|.|.||.:|..:.|:.....||||.||.:.:.:|.:.:|.:..:::::....|||.:...|.  
Yeast   124 DIMFSKRMDICVMAIFFSMIADESYAPSLVKVYAGHSPSDARFYKMLEVRNVNGWVALRFLDNRE 188

  Fly   136 NVKSIRTFMLQIAVISNHQNGRDTHMRQIRIHAPVEGKH 174
            :.:.::...:::....||:||:|||:|.||::.|....|
Yeast   189 DDQLLKCQFIRLLFPVNHENGKDTHLRGIRLYVPSNEPH 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APC10NP_611223.4 ANAPC10 10..193 CDD:367420 53/169 (31%)
DOC1NP_011274.2 DOC1 59..248 CDD:227485 53/169 (31%)

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