DRSC/TRiP Functional Genomics Resources

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Protein Alignment APC10 and Y48G1C.12

DIOPT Version :10

Sequence 1:NP_611223.4 Gene:APC10 / 36975 FlyBaseID:FBgn0034231 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001021777.1 Gene:Y48G1C.12 / 3565580 WormBaseID:WBGene00044345 Length:216 Species:Caenorhabditis elegans


Alignment Length:207 Identity:75/207 - (36%)
Similarity:111/207 - (53%) Gaps:38/207 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SMDEDITANPPPSSEEDPLAEERLGFVREVGAQAVWSLSSCKPGFGVERLRDNIMDTYWQSDGQL 68
            |:..||      .|::.||.        ::.:||:|:|||||.|||::.|..:.::.||||||..
 Worm    18 SIPTDI------DSKDTPLL--------DISSQAIWALSSCKSGFGIDELLSDSVEKYWQSDGPQ 68

  Fly    69 PHLVNIQFHKRTNISQIYIYTDYKLDESYTPSRISIRSGTNFNDLQELQVMDLTEPTGWVQIPIK 133
            ||.:.::|.|:|:::.:..|.|:|.|||||||:|.::.|::..|:...|.....||.||..|.::
 Worm    69 PHTILLEFQKKTDVAMMMFYLDFKNDESYTPSKIQVKMGSSHQDIFFRQTQTFNEPQGWTFIDLR 133

  Fly   134 DGNVKSIRTFMLQIAVISNHQNGRDTHMRQIRI-------------------HAPVEGKHYPLEL 179
            |.|.|..|.|.||:.||.|||||||||:|.:|:                   |.|:..|:     
 Worm   134 DKNGKPNRVFWLQVQVIQNHQNGRDTHIRHVRVLGPQRSRVSTTNRIFTGEPHGPIPDKN----- 193

  Fly   180 FGKFGTVDFQKF 191
            ...|...||..|
 Worm   194 ITNFDDEDFANF 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APC10NP_611223.4 ANAPC10 10..193 CDD:367420 72/201 (36%)
Y48G1C.12NP_001021777.1 APC10 32..168 CDD:176484 62/135 (46%)

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