DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4853 and CG7369

DIOPT Version :9

Sequence 1:NP_611222.2 Gene:CG4853 / 36974 FlyBaseID:FBgn0034230 Length:709 Species:Drosophila melanogaster
Sequence 2:NP_649415.2 Gene:CG7369 / 2768961 FlyBaseID:FBgn0037188 Length:680 Species:Drosophila melanogaster


Alignment Length:680 Identity:224/680 - (32%)
Similarity:320/680 - (47%) Gaps:174/680 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 SNASLMSSSSAITGSDQVIGSVSSTTIGDKSSNISSCDSGHDGLFHSVSMSAPWSHPRDTLTDSL 247
            ||..|   |||..|..   ||..|.||     |::.  .||:.....|..:...|....::|...
  Fly     4 SNGGL---SSATNGRS---GSTGSATI-----NLNL--KGHERTIVGVPGTGASSATTTSITHKT 55

  Fly   248 YCDIPSSADES-----DAVSILNTHLKITEPFD-------------CQTAP----VYAKDIPKKG 290
            ..|:.:....|     :::|.|.....:.:|.:             .|.|.    ||::.....|
  Fly    56 LPDLKTQRSNSACHAHESLSALRRIALLEKPPEKLLSYGAAQSRILGQEAREDFLVYSEGRLHSG 120

  Fly   291 NLDSVVNLLINNN----TKDLRFAFLTTSRLFSPPHQLLSKIIAKIDNEEENV------------ 339
            .|.|::..::..:    .:...||||.::|||..||:||::|....::::::|            
  Fly   121 PLQSLIAHMVPTHEYYPDEGFIFAFLLSARLFVRPHELLAQISQTWEHQQQDVGTGGDVVDDAGQ 185

  Fly   340 -------------------------------------------------LRLLNEWLDTCPGDFS 355
                                                             :|||:||::..|.||.
  Fly   186 GPGRTMMVSINSASPLTQRKGSAAAASHSSELEPRLQQRTNTQRSAQHCIRLLSEWIEIFPYDFR 250

  Fly   356 HELLLQE----------LENK----------------RNVKGLAAFLDGIPQALAQKDE------ 388
            .|.|:|:          ::|.                ..::....||..|....||..:      
  Fly   251 DERLMQQVRILARKCVYIDNSLGKQVSRILQLLVSRLTTLEQYEEFLQTISSEEAQSQQQQHHHH 315

  Fly   389 ---------------------NGRSQLNNLLTKQSSASSLGRQSSIKSLKRFAANVYKTD--NVL 430
                                 ||.|......:..|::||.|..||..:....:......|  .::
  Fly   316 HGHHNHLHNAFQTFLGSSSHANGASGGGGSASGTSNSSSSGHTSSASTSNSISTTPQPDDVFGIM 380

  Fly   431 NNCSSAFELAHQLYAIEYAYLSQIRLEEFVEILEKDELKTCISQTKAGTL----------GSNCI 485
            :.|.|...|||||.|||...||.|..||||:...||..:    |.|.|:.          |...:
  Fly   381 DMCPSCAHLAHQLTAIELERLSHIGPEEFVQAFAKDYQQ----QAKDGSREANNSKCSGGGGGSL 441

  Fly   486 SQV----TIDSYVQWFNQLSYLTATEILKLGKKSQRAQMIDFWVETALECFNTGNFNSLMAILTA 546
            :.:    .::|||||||:||||||:||:|..||.||.::|::|:|||.||||.|||||||||:..
  Fly   442 NDMKKTRNLESYVQWFNRLSYLTASEIVKYPKKKQRVRIIEYWIETARECFNIGNFNSLMAIIAG 506

  Fly   547 LNLTAIARLKKTWAKVQTTKFEGLEHQMDPSSNFLNYRSTMKAAVWRSEREMANEIERAIIPFFS 611
            |||..|.||||||||||:.||..|||||||:|||.:||||:|||:|||| ....|.||.||||||
  Fly   507 LNLAPIGRLKKTWAKVQSAKFSVLEHQMDPTSNFNSYRSTLKAAMWRSE-GATEERERIIIPFFS 570

  Fly   612 LFLKDLHAINESHETKLANGYINFEKCLHLGTQLRNFGKWQRLDCPYEQLPSVVSYLLKAEVLSE 676
            ||:|||:.:||....:|.|.:||||||..|..|:..|.:|::::||:|:||:|::||..:.||:|
  Fly   571 LFVKDLYFLNEGCSNRLPNNHINFEKCSQLAKQVMEFNEWKKVNCPFERLPNVIAYLQNSAVLNE 635

  Fly   677 DLLMKASYESEPPETGEEKDHYKTLKAARK 706
            :.|..||:|.||||..||||.|:|:||..|
  Fly   636 NTLSMASFECEPPENTEEKDRYRTVKAETK 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4853NP_611222.2 RasGEF_N 288..365 CDD:279012 27/151 (18%)
RasGEF 438..638 CDD:279011 118/213 (55%)
CG7369NP_649415.2 RasGEF_N 116..261 CDD:279012 27/144 (19%)
RasGEF 388..649 CDD:214539 141/265 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467065
Domainoid 1 1.000 71 1.000 Domainoid score I9376
eggNOG 1 0.900 - - E1_KOG3541
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 233 1.000 Inparanoid score I2165
Isobase 1 0.950 - 0 Normalized mean entropy S3112
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D246323at33208
OrthoFinder 1 1.000 - - FOG0001827
OrthoInspector 1 1.000 - - otm14078
orthoMCL 1 0.900 - - OOG6_104212
Panther 1 1.100 - - P PTHR23113
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1189
1211.750

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