DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4853 and Rasgef1b

DIOPT Version :10

Sequence 1:NP_611222.2 Gene:CG4853 / 36974 FlyBaseID:FBgn0034230 Length:709 Species:Drosophila melanogaster
Sequence 2:XP_017454918.1 Gene:Rasgef1b / 100361238 RGDID:1562220 Length:480 Species:Rattus norvegicus


Alignment Length:456 Identity:174/456 - (38%)
Similarity:268/456 - (58%) Gaps:69/456 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 GNLDSVVNLLINN----NTKDLRFAFLTTSRLFSPPHQLLSKI---------IAKIDNEEE---- 337
            |:|::::..|:.|    ..:...|.||.:||||..|::|::|:         :::.|.::.    
  Rat    48 GSLEALIQHLVPNVDYYPDRTYIFTFLLSSRLFMHPYELMAKVCHLCIEHQRLSEGDGDKNQTRK 112

  Fly   338 ---NVLRLLNEWLDTCPGDFSHELLLQELEN-------------KRNVKGLAAFLDGIPQALAQK 386
               .:|:||.||.:|.|.||..|.:::.|::             ::||:.:...|.....||:|.
  Rat   113 IAPKILQLLTEWTETFPYDFRDERMMRNLKDLAHRMASGEEQTYRKNVQQMMQCLIRKLAALSQY 177

  Fly   387 DENGRSQLNNLLTKQSSASSLGRQSSIK----SLKRFAANVYKTDNVLNNCSSAFELAHQLYAIE 447
            :|        :|.|.||.:: .|.:.:|    |::|         :::..||..:.||.||..||
  Rat   178 EE--------VLAKLSSTAT-DRLTVLKAKPQSIQR---------DIMTVCSDPYTLAQQLTHIE 224

  Fly   448 YAYLSQIRLEEFVE-ILEKDEL---KTCISQTKAGTLGSNCISQVTIDSYVQWFNQLSYLTATEI 508
            ...|:.|..||||: .::||.|   |.|.|:.|         ....:::||:|||:||||.||||
  Rat   225 LERLNYIGPEEFVQAFVQKDPLDNDKNCYSERK---------KTRNLEAYVEWFNRLSYLVATEI 280

  Fly   509 LKLGKKSQRAQMIDFWVETALECFNTGNFNSLMAILTALNLTAIARLKKTWAKVQTTKFEGLEHQ 573
            ....||..||:||:::::.|.||||.|||||||||::.:|::.::|||||||||:|.||:.||||
  Rat   281 CMPVKKKHRARMIEYFIDVARECFNIGNFNSLMAIISGMNMSPVSRLKKTWAKVKTAKFDILEHQ 345

  Fly   574 MDPSSNFLNYRSTMKAAVWRSEREMANEIERAIIPFFSLFLKDLHAINESHETKLANGYINFEKC 638
            |||||||||||:.::.|..||....::. |:.:||||||.:||::.:||....:|.||::||||.
  Rat   346 MDPSSNFLNYRTALRGAAQRSLTAHSSR-EKIVIPFFSLLIKDIYFLNEGCVNRLPNGHVNFEKF 409

  Fly   639 LHLGTQLRNFGKWQRLDCPYEQLPSVVSYLLKAEVLSEDLLMKASYESEPPETGEEKDHYKTLKA 703
            ..|..|:..|..|::::||:|:...|:.|||...|.|||.|..||||||.||...|||.:|:|:|
  Rat   410 WELAKQVSEFMTWKQVECPFERDRKVLQYLLSVPVFSEDALYLASYESEGPENNIEKDRWKSLRA 474

  Fly   704 A 704
            :
  Rat   475 S 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4853NP_611222.2 REM 292..>365 CDD:470601 25/92 (27%)
RasGEF 438..638 CDD:459872 100/203 (49%)
Rasgef1bXP_017454918.1 REM 49..174 CDD:100121 28/124 (23%)
RasGEF 216..410 CDD:459872 101/203 (50%)

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