DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4847 and ctsc

DIOPT Version :9

Sequence 1:NP_725686.1 Gene:CG4847 / 36973 FlyBaseID:FBgn0034229 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_012812143.2 Gene:ctsc / 407938 XenbaseID:XB-GENE-940480 Length:458 Species:Xenopus tropicalis


Alignment Length:300 Identity:86/300 - (28%)
Similarity:136/300 - (45%) Gaps:82/300 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 EFLSQLTGLKRS------PEAKARAAASL------KLVNLPAKP-------------IPDAFDWR 210
            :|:.|:..:::|      ||.:......|      :...:|.:|             :|..:|||
 Frog   169 DFVKQINEVQKSWTATAYPEYEGMTIEDLIRRAGGRNSRIPMRPRPAPLPTDEKYQGLPTEWDWR 233

  Fly   211 EHGG---VTPVKFQGTCGSCWAFATTGAIEGHTFRKT--GSLPNLSEQNLVDCGPVEDFGLNGCD 270
            ...|   ||||:.|.:||||:||::.|.:|.....::  ...|.||.|.:|.|....    .||:
 Frog   234 NIAGYNFVTPVRNQASCGSCYAFSSMGMLESRIQIRSQLSQKPILSPQQVVSCSNYS----QGCE 294

  Fly   271 GGFQE-AAFCFIDEVQKGVSQEGAYPYIDNKGTCKYDGSKSGATLQGFAAIPPKDEEQ------- 327
            |||.. .|..::.:.  |:.:|...|         |.||.|..||        ||.:|       
 Frog   295 GGFPYLIAGKYVSDY--GIVEESDLP---------YTGSDSPCTL--------KDSQQKYYTAEY 340

  Fly   328 --------------LKKVVATLGPVACSVNGLETLKNYAGGIYN----DDECNKGE-PNHSILVV 373
                          :|..:...||::.:....:...:|..|:|:    .|:.|..: .||::|:|
 Frog   341 HYVGGFYGGCNEAYMKLELVLGGPLSVAFEVYDDFMHYRSGVYHHTGLQDKFNPFQLTNHAVLLV 405

  Fly   374 GYGSEK--GQDYWIVKNSWDDTWGEKGYFRLPRGKNYCFI 411
            |||:::  |:.||||||||.::||||||||:.||.:.|.|
 Frog   406 GYGTDQQTGEKYWIVKNSWGESWGEKGYFRIRRGTDECAI 445

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity