DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4847 and cpr-4

DIOPT Version :9

Sequence 1:NP_725686.1 Gene:CG4847 / 36973 FlyBaseID:FBgn0034229 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_504682.1 Gene:cpr-4 / 179053 WormBaseID:WBGene00000784 Length:335 Species:Caenorhabditis elegans


Alignment Length:253 Identity:70/253 - (27%)
Similarity:104/253 - (41%) Gaps:53/253 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 IPDAFD----WREHGGVTPVKFQGTCGSCWAFATTGAIEGHTFRKTGSLPN--LSEQNLVDCGPV 261
            ||..||    |.....:..::.|..||||||||...|........:....|  ||.::::.|  .
 Worm    81 IPATFDARTQWPNCMSINNIRDQSDCGSCWAFAAAEAASDRFCIASNGAVNTLLSAEDVLSC--C 143

  Fly   262 EDFGLNGCDGGFQEAAFCFIDEVQKGVSQEGAY-------PY--------IDNK--GTCKYDGSK 309
            .:.|. ||:||:...|:.::  |:.|....|:|       ||        :.|.  .:|..||..
 Worm   144 SNCGY-GCEGGYPINAWKYL--VKSGFCTGGSYEAQFGCKPYSLAPCGETVGNVTWPSCPDDGYD 205

  Fly   310 SGATLQ------------------GFAAIPPKDEEQLKKVVATLGPVACSVNGLETLKNYAGGIY 356
            :.|.:.                  ..|....|...|::..:...|||..:....|....|..|:|
 Worm   206 TPACVNKCTNKNYNVAYTADKHFGSTAYAVGKKVSQIQAEIIAHGPVEAAFTVYEDFYQYKTGVY 270

  Fly   357 ---NDDECNKGEPNHSILVVGYGSEKGQDYWIVKNSWDDTWGEKGYFRLPRGKNYCFI 411
               ...|..    .|:|.::|:|::.|..||:|.|||:..|||.||||:.||.|.|.|
 Worm   271 VHTTGQELG----GHAIRILGWGTDNGTPYWLVANSWNVNWGENGYFRIIRGTNECGI 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4847NP_725686.1 Inhibitor_I29 112..172 CDD:285458
Peptidase_C1A 204..418 CDD:239068 69/252 (27%)
cpr-4NP_504682.1 Peptidase_C1A_CathepsinB 82..331 CDD:239111 69/252 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53545
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.