DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr54B and khdrbs2

DIOPT Version :9

Sequence 1:NP_001261050.1 Gene:qkr54B / 36966 FlyBaseID:FBgn0022987 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_001072215.1 Gene:khdrbs2 / 779662 XenbaseID:XB-GENE-490722 Length:345 Species:Xenopus tropicalis


Alignment Length:362 Identity:136/362 - (37%)
Similarity:194/362 - (53%) Gaps:61/362 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 EYIRDCMAERNRMDRKFPIAEKLLEGEIEKVQ-TTGRIPSREQKYADIYREKPLRISQRVLVPIR 130
            :|:.:.|||::.:|..|..|.:||:.||.|.| :.|.....|:||.||...|.:::|:|||:|::
 Frog     5 KYLPELMAEKDSLDPSFVHAMRLLDEEIVKFQDSEGNKEDGEKKYLDIISNKNIKLSERVLIPVK 69

  Fly   131 EHPKFNFVGKLLGPKGNSLRRLQEETLCKMTVLGRNSMRDRVKEEELRSSKDPKYAHLNSDLHVE 195
            ::||||||||||||:||||:||||||..||::||:.||||::||||||.|.:.|:|||:.:|||.
 Frog    70 QYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKIKEEELRKSDEAKHAHLSDELHVL 134

  Fly   196 ISTIAPPAEAYARIAYAMAELRKYLIPDSNDIIRQEQLRELMDSTSLNDNDNAKSGYKKTSHMQG 260
            :...|||.|||:|:::|:.|::|:|:||.||.|||||||||   :.||.:|:::.|  |.:..:|
 Frog   135 LEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLREL---SYLNGSDDSERG--KGTRGRG 194

  Fly   261 -------GNNVLGGGSINPI---GGVKNTPHHSYRSSQPSSFSKNVLAPKQKVMSILEKARTAMD 315
                   ..|  .||.|:|.   .|...|..........|:.::.:..|:.|........|....
 Frog   195 IRVPSTPSRN--RGGVISPAFPGRGASATRGAPITRGTISTVARGIPTPRAKAAPTTPGYRLPPP 257

  Fly   316 ---ETY-GRGYDDGLGYD-PHQSYDSY------------SYGTHGHGPHGPPANILGGVGGISGG 363
               ||| ..|||||.|.| ..||||.|            .|..:.||.:....|           
 Frog   258 LTIETYDDYGYDDGFGEDYDEQSYDIYENNYNSQTQSVSEYYDYEHGTNEESYN----------- 311

  Fly   364 GGRGGHYESSDYEPDY----------GRREYYQHSPG 390
                 |||..::....          .|..|.:|..|
 Frog   312 -----HYEQEEWSKSRSTLKAPLQRPARAGYREHPYG 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr54BNP_001261050.1 Qua1 68..117 CDD:292891 19/49 (39%)
SF1_like-KH 122..237 CDD:239088 72/114 (63%)
khdrbs2NP_001072215.1 Qua1 5..57 CDD:374463 19/51 (37%)
SF1_like-KH 61..180 CDD:239088 74/121 (61%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 178..224 13/49 (27%)
Sam68-YY 263..317 CDD:374636 20/69 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 321..345 4/23 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 88 1.000 Domainoid score I7806
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 180 1.000 Inparanoid score I3883
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1012406at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9347
Panther 1 1.100 - - LDO PTHR11208
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1163
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.070

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