DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr54B and khdrbs2

DIOPT Version :9

Sequence 1:NP_001261050.1 Gene:qkr54B / 36966 FlyBaseID:FBgn0022987 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_001070758.1 Gene:khdrbs2 / 768147 ZFINID:ZDB-GENE-061013-497 Length:346 Species:Danio rerio


Alignment Length:319 Identity:131/319 - (41%)
Similarity:188/319 - (58%) Gaps:55/319 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 NEYIRDCMAERNRMDRKFPIAEKLLEGEIEK-----VQTTGRIPSREQKYADIYREKPLRISQRV 125
            ::|:.:.:||:..:|..|..|.:||..||||     ::..|.:    :||.||...|.:::|:||
Zfish     4 DKYLPELVAEKESLDASFVHAMRLLAEEIEKFEGDELRKDGEV----KKYLDIISNKNIKLSERV 64

  Fly   126 LVPIREHPKFNFVGKLLGPKGNSLRRLQEETLCKMTVLGRNSMRDRVKEEELRSSKDPKYAHLNS 190
            |:|::::||||||||||||:|||::||||||..||::||:.||||:.||||||.|.:.|||||::
Zfish    65 LIPVQQYPKFNFVGKLLGPRGNSMKRLQEETGAKMSILGKGSMRDKGKEEELRKSGEAKYAHLSN 129

  Fly   191 DLHVEISTIAPPAEAYARIAYAMAELRKYLIPDSNDIIRQEQLRELMDSTSLNDNDNAKSG---- 251
            ||||.|...|||.|||:|:::|:.|::|:|:||.||.|||||||||   :.||.:|:...|    
Zfish   130 DLHVLIEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLREL---SYLNGSDDPSRGRSAR 191

  Fly   252 -----YKKTSHMQGGNNVL-----GGGSINPIGGVKNTPHHSYRSSQPSSFSKNVLAPKQKVMSI 306
                 ...|:..:|..:..     |.|:..|.|.|      |.|:|.|:. ::.|.||:.:..:.
Zfish   192 GRGLRLTSTASPRGRGSAAPPAPPGRGAAAPRGTV------SSRTSVPTP-ARGVSAPRTRGTAG 249

  Fly   307 LEKART----AMDETY-GRGYDDGLGYD---PHQSYDSY------------SYGTHGHG 345
            ....|.    |..:|| ..||||  |||   ..|||:||            .|..:|||
Zfish   250 TPGYRAPSLQATHKTYEDYGYDD--GYDGEYDDQSYESYDDNYSNQSKSVSEYYEYGHG 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr54BNP_001261050.1 Qua1 68..117 CDD:292891 17/53 (32%)
SF1_like-KH 122..237 CDD:239088 74/114 (65%)
khdrbs2NP_001070758.1 Qua1 6..57 CDD:292891 17/54 (31%)
SF1_like-KH 61..180 CDD:239088 76/121 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 175..292 35/128 (27%)
Sam68-YY <281..>306 CDD:293176 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590097
Domainoid 1 1.000 87 1.000 Domainoid score I7974
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 190 1.000 Inparanoid score I3866
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1012406at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26159
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11208
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1163
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.860

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