DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr54B and nsr

DIOPT Version :10

Sequence 1:NP_001261050.1 Gene:qkr54B / 36966 FlyBaseID:FBgn0022987 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_611682.1 Gene:nsr / 37577 FlyBaseID:FBgn0034740 Length:340 Species:Drosophila melanogaster


Alignment Length:336 Identity:135/336 - (40%)
Similarity:185/336 - (55%) Gaps:62/336 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 NGDASAHDHGHHGGDPGGNVQINEKANEYIRDCMAERNRMDRKFPIAEKLLEGEIEKVQTTGRIP 104
            |.|....|      .|....::||.|.:::.|...||.|:..:||:...|::..:::|.:|||||
  Fly    12 NQDQPTQD------QPTYQPRLNEVAQKFLADLDEERKRLSAEFPLCALLIDESVDRVFSTGRIP 70

  Fly   105 SREQKYADIYREKPLRISQRVLVPIREHPKFNFVGKLLGPKGNSLRRLQEETLCKMTVLGRNSMR 169
            .:| .|||:|.::|::|:|:|.||:.:.|||||..|:|||||||:|||:|||.||:.:.||:|||
  Fly    71 GKE-FYADVYHQRPMKITQKVFVPVNKFPKFNFARKILGPKGNSVRRLKEETNCKIVIKGRSSMR 134

  Fly   170 DRVKEEELRSSKDPKYAHLNSDLHVEISTIAPPAEAYARIAYAMAELRKYLIPDSNDIIRQEQLR 234
            ||.||||||||.||:||||:.||.:|:|.:|||||.|||||||:||:|||||||.||.:..||.|
  Fly   135 DRNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQR 199

  Fly   235 ELMDSTSLNDNDNAKSGYKKTSHMQGGNNVLGGGSI--NPIGGVKNTPHHSYRSSQPSSFSKNVL 297
            |||:   :|.....||         .|.|:....||  ..|||.:|.                  
  Fly   200 ELME---MNPESAKKS---------NGLNMAPYRSIFDKTIGGNRNG------------------ 234

  Fly   298 APK--QKVMSILEKARTAMD-ETYGRGYDD--------GLGYD---PHQSYD---------SYSY 339
            |||  .::..:.|..|...| |.....||:        .||::   |..|..         :|.|
  Fly   235 APKYNNQIRRVTENPREVADMEEVEYDYDEHRMPPSRPSLGFEYSKPPPSMTATNATPFKRAYPY 299

  Fly   340 GTHGHGPHGPP 350
            .|..:....||
  Fly   300 PTDMNRTREPP 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr54BNP_001261050.1 Qua1 68..118 CDD:465079 18/49 (37%)
KH-I_KHDRBS 117..218 CDD:411812 66/100 (66%)
nsrNP_611682.1 KH-I_KHDRBS 82..183 CDD:411812 66/100 (66%)

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