DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr54B and Khdrbs2

DIOPT Version :9

Sequence 1:NP_001261050.1 Gene:qkr54B / 36966 FlyBaseID:FBgn0022987 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_579852.1 Gene:Khdrbs2 / 170843 RGDID:621738 Length:349 Species:Rattus norvegicus


Alignment Length:370 Identity:138/370 - (37%)
Similarity:196/370 - (52%) Gaps:81/370 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 EYIRDCMAERNRMDRKFPIAEKLLEGEIEKVQ-TTGRIPSREQKYADIYREKPLRISQRVLVPIR 130
            :|:.:.|||::.:|..|..|.:||..||||.| :.||....|:||.|:...|.:::|:|||:|::
  Rat     5 KYLPELMAEKDSLDPSFVHASRLLAEEIEKFQGSDGRKEDEEKKYLDVISNKNIKLSERVLIPVK 69

  Fly   131 EHPKFNFVGKLLGPKGNSLRRLQEETLCKMTVLGRNSMRDRVKEEELRSSKDPKYAHLNSDLHVE 195
            ::||||||||||||:||||:||||||..||::||:.||||:.||||||.|.:.|||||:.:|||.
  Rat    70 QYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVL 134

  Fly   196 ISTIAPPAEAYARIAYAMAELRKYLIPDSNDIIRQEQLRELMDSTSLNDNDNAKSG--------- 251
            |...|||.|||:|:::|:.|::|:|:||.||.|||||||||   :.||.::.:..|         
  Rat   135 IEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLREL---SYLNGSEESGRGRGIRGRGIR 196

  Fly   252 YKKTSHMQGGNNVL------GGGSINPIGGVKNTPHHSYRSSQP-SSFSKNVLAPKQKVMSILEK 309
            ...|:..:|....:      |.|.:.|.|....      |.:.| ...::.|..|:.:..:.:..
  Rat   197 ITPTAPSRGRGGAVPPPPPPGRGVLTPRGTTVT------RGALPVPPVARGVPTPRARGTAAVPG 255

  Fly   310 ART---AMDETYGR-GYDDGLG--YDPHQSYDSY--SYGT----------HGHGPH--------- 347
            .|.   ...|.|.. |||||.|  || .|:|::|  ||.|          :|||.:         
  Rat   256 YRAPPPPAPEAYEEYGYDDGYGGEYD-DQTYEAYDNSYVTPTQSVPEYYDYGHGVNEDAYDSYAP 319

  Fly   348 -----------GPPANILGGVGGISGGGGRGGHYESSDYEPDYGR 381
                       .||..           ..|||:.|.     .|||
  Rat   320 EEWTTTRSSLKAPPPR-----------SARGGYREH-----PYGR 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr54BNP_001261050.1 Qua1 68..117 CDD:292891 20/49 (41%)
SF1_like-KH 122..237 CDD:239088 74/114 (65%)
Khdrbs2NP_579852.1 Qua1 6..57 CDD:292891 20/50 (40%)
SF1_like-KH 61..180 CDD:239088 76/121 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..263 12/87 (14%)
Sam68-YY 271..321 CDD:293176 17/50 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 320..349 9/45 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348927
Domainoid 1 1.000 90 1.000 Domainoid score I7586
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1012406at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8931
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11208
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1163
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.810

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