DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr54B and Sf1

DIOPT Version :9

Sequence 1:NP_001261050.1 Gene:qkr54B / 36966 FlyBaseID:FBgn0022987 Length:617 Species:Drosophila melanogaster
Sequence 2:XP_038936270.1 Gene:Sf1 / 117855 RGDID:620645 Length:641 Species:Rattus norvegicus


Alignment Length:518 Identity:110/518 - (21%)
Similarity:179/518 - (34%) Gaps:171/518 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 AERNRMD-RKFPIAEKLLEGEIEKVQTTGRIPSREQKYADIYREKPLRISQRVLVPIREHPKFNF 137
            :|..|:: |:|...:||.|.....:.....:....:..|| |:....|:|.:|::|..|:|:.||
  Rat    91 SEGKRLNTREFRTRKKLEEERHTLITEMVALNPDFKPPAD-YKPPATRVSDKVMIPQDEYPEINF 154

  Fly   138 VGKLLGPKGNSLRRLQEETLCKMTVLGRNSMRD----RVKEEELRSSKDPKYAHLNSDLHVEIST 198
            ||.|:||:||:|:.:::|...|:.:.|:.|:::    |...:.|....:|        ||..:: 
  Rat   155 VGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEP--------LHALVT- 210

  Fly   199 IAPPAEAYARIAYAMAELRKYL-----IPDSNDIIRQEQLREL--MDSTSLNDNDN--------- 247
                |.....:..|:.::|..|     .|:..:.:|:.|||||  ::.| |.::||         
  Rat   211 ----ANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGT-LREDDNRILRPWQSS 270

  Fly   248 -----------AKSG----------YKKTSHMQGGNN-------------VLG----GGSINPIG 274
                       .|.|          :::....|...:             .||    ..|:....
  Rat   271 ETRSITNTTVCTKCGGAGHIASDCKFQRPGDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTS 335

  Fly   275 GVKNTPHHSYRSSQPSSFSKNVLAPKQKVMSILEKARTAMDETYGRGYDDGLGYDPHQSYDSYSY 339
            |...||..|  :.:|::.:.|  .|...:||..:.....|:.          |...::.|     
  Rat   336 GPATTPLAS--APRPAAPASN--PPPPSLMSTTQSRPPWMNS----------GPSENRPY----- 381

  Fly   340 GTHGHGPHGPPANILGGVGGISGG------------GGRGGHYESSDYEPDYGRREYYQ------ 386
                ||.||      ||.||..||            ||.|||  ...:.|:.....:.|      
  Rat   382 ----HGMHG------GGPGGPGGGPHSFPHPLPSLTGGHGGH--PMQHNPNGPPPPWMQPPPPPM 434

  Fly   387 ----HSPGYSAGGGGGVGLGTGGASQSNAIGGSGLSSNHNRSHVNRXNLLDPSSASGGRGTNPAA 447
                |.||:.           |.......:|.:.:.|...|.|             .|:|..|..
  Rat   435 NQGPHPPGHH-----------GPPPMDQYLGSTPVGSGVYRLH-------------QGKGMMPPP 475

  Fly   448 TTQNLTMKSQPNSSNNFLPNHGASECQNGKNINPNYYYNSNGSSKVNQQQLQQSQPNLPPQLS 510
            ....:.....|.|.....|..|..         |.:           |||.||..|..||..|
  Rat   476 PMGMMPPPPPPPSGQPPPPPSGPL---------PPW-----------QQQQQQPPPPPPPSSS 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr54BNP_001261050.1 Qua1 68..117 CDD:292891 10/43 (23%)
SF1_like-KH 122..237 CDD:239088 35/125 (28%)
Sf1XP_038936270.1 MSL5 19..259 CDD:227503 48/182 (26%)
ZnF_C2HC 280..295 CDD:197667 2/14 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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