DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr54B and KHDRBS1

DIOPT Version :9

Sequence 1:NP_001261050.1 Gene:qkr54B / 36966 FlyBaseID:FBgn0022987 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_006550.1 Gene:KHDRBS1 / 10657 HGNCID:18116 Length:443 Species:Homo sapiens


Alignment Length:377 Identity:135/377 - (35%)
Similarity:190/377 - (50%) Gaps:74/377 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RKPGGSIGAPGGAH----------------NGDASAHDHGHHGG-------DPGGNVQIN-EKAN 66
            |..||..|:.|||.                ..||:.      ||       .|.....:. |..|
Human    43 RSRGGGGGSRGGARASPATQPPPLLPPSATGPDATV------GGPAPTPLLPPSATASVKMEPEN 101

  Fly    67 EYIRDCMAERNRMDRKFPIAEKLLEGEIEKVQTTGRIPSREQKYADIYREKPLRISQRVLVPIRE 131
            :|:.:.|||::.:|..|..|.:||..||||:|........|:.|.|::..|.:::.:|||:|:::
Human   102 KYLPELMAEKDSLDPSFTHAMQLLTAEIEKIQKGDSKKDDEENYLDLFSHKNMKLKERVLIPVKQ 166

  Fly   132 HPKFNFVGKLLGPKGNSLRRLQEETLCKMTVLGRNSMRDRVKEEELRSSKDPKYAHLNSDLHVEI 196
            :||||||||:|||:||:::||||||..|::|||:.||||:.||||||...||||||||.||||.|
Human   167 YPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFI 231

  Fly   197 STIAPPAEAYARIAYAMAELRKYLIPDSNDIIRQEQLRELMDSTSLNDNDNAKSGYKKTSHMQG- 260
            ....||.||||.:|:||.|::|:|:||..|.|.|||..||   :.||       |..:.|..:| 
Human   232 EVFGPPCEAYALMAHAMEEVKKFLVPDMMDDICQEQFLEL---SYLN-------GVPEPSRGRGV 286

  Fly   261 ---GNN-------VLGGGSINPIGG--VKNTPHHSYRSSQPSSFSKNVLAPKQKVMSILEKARTA 313
               |..       |..|..:.|..|  |:.||... ..::.::.::.|..|.....:...:||||
Human   287 PVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRG-AITRGATVTRGVPPPPTVRGAPAPRARTA 350

  Fly   314 -----------MDETYGR-GYDDGLGYDPHQSYDSY--------SYGTHGHG 345
                       ..|||.. ||||......::.|:.|        .|..:|||
Human   351 GIQRIPLPPPPAPETYEEYGYDDTYAEQSYEGYEGYYSQSQGDSEYYDYGHG 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr54BNP_001261050.1 Qua1 68..117 CDD:292891 17/48 (35%)
SF1_like-KH 122..237 CDD:239088 70/114 (61%)
KHDRBS1NP_006550.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..96 12/58 (21%)
Involved in homodimerization. /evidence=ECO:0000305|PubMed:26758068 100..260 83/159 (52%)
Qua1 102..153 CDD:406639 17/50 (34%)
KH-I_KHDRBS1 152..257 CDD:411896 63/104 (61%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 280..316 8/35 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..346 2/18 (11%)
Interaction with HNRNPA1. /evidence=ECO:0000269|PubMed:17371836 351..443 13/52 (25%)
Sam68-YY 366..415 CDD:406871 11/37 (30%)
Interaction with ZBTB7A. /evidence=ECO:0000269|PubMed:24514149 400..420 3/3 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 411..443
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155061
Domainoid 1 1.000 90 1.000 Domainoid score I7770
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.928771 Normalized mean entropy S2169
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1012406at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8456
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11208
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1163
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.760

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