DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr54B and KHDRBS3

DIOPT Version :10

Sequence 1:NP_001261050.1 Gene:qkr54B / 36966 FlyBaseID:FBgn0022987 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_006549.1 Gene:KHDRBS3 / 10656 HGNCID:18117 Length:346 Species:Homo sapiens


Alignment Length:314 Identity:139/314 - (44%)
Similarity:184/314 - (58%) Gaps:45/314 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 EYIRDCMAERNRMDRKFPIAEKLLEGEIEKVQT-TGRIPSREQKYADIYREKPLRISQRVLVPIR 130
            :|:.:.|||::.:|..|..|.:|:..||||.|. .|:   .|:||.|:...|.:::.|:||:|::
Human     4 KYLPELMAEKDSLDPSFTHALRLVNQEIEKFQKGEGK---DEEKYIDVVINKNMKLGQKVLIPVK 65

  Fly   131 EHPKFNFVGKLLGPKGNSLRRLQEETLCKMTVLGRNSMRDRVKEEELRSSKDPKYAHLNSDLHVE 195
            :.||||||||||||:||||:|||||||.||::||:.||||:.||||||.|.:.||.|||.||||.
Human    66 QFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVL 130

  Fly   196 ISTIAPPAEAYARIAYAMAELRKYLIPDSNDIIRQEQLRELMDSTSLN-DNDNAKSGY---KKTS 256
            |...|||||||||:.:|:.|::|:||||.||.|||.||:||   |.|| .::||....   |.|.
Human   131 IEVFAPPAEAYARMGHALEEIKKFLIPDYNDEIRQAQLQEL---TYLNGGSENADVPVVRGKPTL 192

  Fly   257 HMQG--------GNNVLGGGSINPIGGV----KNTPHHSYRSSQPSSFSKNVLAPKQKVM---SI 306
            ..:|        |.   ||.:..|:|.|    ..||.....:..|.|..:.:|.|:.:.:   ..
Human   193 RTRGVPAPAITRGR---GGVTARPVGVVVPRGTPTPRGVLSTRGPVSRGRGLLTPRARGVPPTGY 254

  Fly   307 LEKARTAMDETYGR-GYDDGLG--YDPHQSYDSY--SYGT----------HGHG 345
            .........||||. .||||.|  || .||||||  ||.|          :|||
Human   255 RPPPPPPTQETYGEYDYDDGYGTAYD-EQSYDSYDNSYSTPAQSGADYYDYGHG 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr54BNP_001261050.1 Qua1 68..118 CDD:465079 18/50 (36%)
KH-I_KHDRBS 117..218 CDD:411812 64/100 (64%)
KHDRBS3NP_006549.1 Involved in homodimerization. /evidence=ECO:0000269|PubMed:26758068 1..160 87/158 (55%)
Qua1 4..53 CDD:465079 18/51 (35%)
KH-I_KHDRBS3 48..160 CDD:411898 69/111 (62%)
Interaction with SIAH1. /evidence=ECO:0000269|PubMed:15163637 212..251 9/38 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..267 11/53 (21%)
Sam68-YY 266..320 CDD:465182 21/43 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..346
Blue background indicates that the domain is not in the aligned region.

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