DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr54B and khdrbs3

DIOPT Version :10

Sequence 1:NP_001261050.1 Gene:qkr54B / 36966 FlyBaseID:FBgn0022987 Length:617 Species:Drosophila melanogaster
Sequence 2:XP_073787504.1 Gene:khdrbs3 / 101867535 ZFINID:ZDB-GENE-130530-892 Length:342 Species:Danio rerio


Alignment Length:340 Identity:137/340 - (40%)
Similarity:185/340 - (54%) Gaps:53/340 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 NEKANEYIRDCMAERNRMDRKFPIAEKLLEGEIEKVQTTGRIPSREQKYADIYREKPLRISQRVL 126
            |||   |:.:.|||::.:|..|..:.:||:.||||||...  ...::|:.|:...|.:::.|:||
Zfish     3 NEK---YLPELMAEKDSLDPSFQHSMRLLDQEIEKVQKDE--DKEDEKFIDVVINKNMKLGQKVL 62

  Fly   127 VPIREHPKFNFVGKLLGPKGNSLRRLQEETLCKMTVLGRNSMRDRVKEEELRSSKDPKYAHLNSD 191
            :|:::.||||||||||||:||||:||||:||.||::||:.||||:.||||||.|.:.||.|||.|
Zfish    63 IPVKQFPKFNFVGKLLGPRGNSLKRLQEDTLTKMSILGKGSMRDKEKEEELRKSGETKYHHLNED 127

  Fly   192 LHVEISTIAPPAEAYARIAYAMAELRKYLIPDSNDIIRQEQLRELMDSTSLN-DNDNAKSGYKKT 255
            |||.|...|||||||||:.:|:.|::|:||||.||.|||.||:||   |.|| .:::||....:.
Zfish   128 LHVLIEVFAPPAEAYARMGHALEEIKKFLIPDYNDEIRQAQLQEL---TYLNGGSEDAKVPAARG 189

  Fly   256 SHMQGGNNVLGGGSINPIGGVKNTPHHSYRSSQPSSFSKNVLAPKQKVMSILEKARTA------- 313
            .....|......|:....|||........|.:.|.....:.:...:.|.....:||.|       
Zfish   190 KTTTRGRGTSAPGTHRTRGGVPPPQAAVPRGAAPRGAPPSRVPSSRGVAVSSRRARGAPPPPGYR 254

  Fly   314 -----MDETYGR-GYDDGLG--YDPHQSYDS---------------YSYGTHG-----HGPH--- 347
                 :.:|||. .||||.|  || .|.|||               |.||..|     :||.   
Zfish   255 PPPAVVQDTYGEYEYDDGYGTAYD-DQGYDSYDNNYNNQAQNSDDYYEYGISGDSYDSYGPEEWT 318

  Fly   348 -----GPPANILGGV 357
                 .|||....||
Zfish   319 NNRNKAPPARTSKGV 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr54BNP_001261050.1 Qua1 68..118 CDD:465079 16/49 (33%)
KH-I_KHDRBS 117..218 CDD:411812 63/100 (63%)
khdrbs3XP_073787504.1 None

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