DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tes and RGA1

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_014770.1 Gene:RGA1 / 854294 SGDID:S000005653 Length:1007 Species:Saccharomyces cerevisiae


Alignment Length:144 Identity:38/144 - (26%)
Similarity:51/144 - (35%) Gaps:42/144 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   627 CADCNQPIAMGEV-AVKADRAGKEIAWHPGCFKCITCRELLADLVYFFHQGQ----VF------- 679
            |..|.:.|..|.. .:..||      ||..||.|..|.:.|:....|...|.    .|       
Yeast    13 CVRCKEFITTGHAYELGCDR------WHTHCFACYKCEKPLSCESDFLVLGTGALICFDCSDSCK 71

  Fly   680 -CGR---DLAIRLKIPRCRACDELIFTKEYTAAEEATFHIKHFCCYQCDEPLAGQQYIADEKSNM 740
             ||:   ||||.|.......|.:.                  |.|.:|.|.:|..:| |..|..:
Yeast    72 NCGKKIDDLAIILSSSNEAYCSDC------------------FKCCKCGENIADLRY-AKTKRGL 117

  Fly   741 PLCLLCYDRLFAVR 754
             .||.|:::|.|.|
Yeast   118 -FCLSCHEKLLAKR 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 18/72 (25%)
LIM2_Testin_like 691..748 CDD:188727 12/56 (21%)
LIM 755..810 CDD:295319 38/144 (26%)
RGA1NP_014770.1 LIM1_Rga 13..67 CDD:188780 16/59 (27%)
LIM2_Rga 70..123 CDD:188781 18/72 (25%)
Smc <569..>673 CDD:224117
RhoGAP 803..1002 CDD:214618
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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