DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tes and Tgfb1i1

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:XP_006230411.1 Gene:Tgfb1i1 / 84574 RGDID:620173 Length:473 Species:Rattus norvegicus


Alignment Length:426 Identity:115/426 - (26%)
Similarity:158/426 - (37%) Gaps:110/426 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   453 ASLAELRGLNPATRAQLQSVGLDKNMLQSAVSNAPYYDRLFR--SLHDKGISHDQCHLLQPM--- 512
            |.|::|.    .|.:.:..:|..|......::..|.|....:  |....|.|.|:.||...:   
  Rat    18 ALLSDLE----TTTSHMSRLGAPKERPPETLTPPPPYGHQPQTGSGESSGASGDKDHLYSTVCKP 78

  Fly   513 ---KQV--------------HDWLLDDDQLLDEI--------DKVFAD-----MANG-------- 539
               |.|              .:.|.:.|:||.|:        |::.:.     ||.|        
  Rat    79 RSPKSVAPVAPPFSSSSGVLGNGLCELDRLLQELNATQFNITDEIMSQFPSSKMAEGEGKEDQSE 143

  Fly   540 CKDI------SYPKPS-------LGELPTSQSSDSGFH-------SKPPTP--------GYGSED 576
            .|.|      ::|.||       ..||....:|.|.|.       |.||.|        |..|..
  Rat   144 DKSITTVPSSTFPAPSKPSATSATQELDRLMASLSDFRVQNHLPASGPPQPPAVSPTREGCPSPP 208

  Fly   577 LTAGQGRFASIPGIEDMNMYPSCAGMPEQFQQLRLHGDEASGKNSTRTILCADCNQPIAMGEVAV 641
            ....:|...::.|:...::  |..|:|.|          |.|       ||..||:||| |:|..
  Rat   209 GQTNKGSLDTMLGLLQSDL--SRRGVPTQ----------AKG-------LCGSCNKPIA-GQVVT 253

  Fly   642 KADRAGKEIAWHPGCFKCITCRELLADLVYFFHQGQVFCGRDLAIRLKIPRCRACDELIFTKEYT 706
            ...|     ||||..|.|..|...|....:|...|..||......|.. |||..|::.|..|..|
  Rat   254 ALGR-----AWHPEHFLCRGCSTTLGGSSFFEKDGAPFCPECYFERFS-PRCGFCNQPIRHKMVT 312

  Fly   707 AAEEATFHIKHFCCYQCDEPLAGQQYIADEKSNMPLCLLCYDRLFAVRCQRCKVAIGP-ADQGVA 770
            |. ...:|.:||||..|.||...:.:  .|:...|.|...:.:|||.|||.|:   || .|..::
  Rat   313 AL-GTHWHPEHFCCVSCGEPFGEEGF--HEREGRPYCRRDFLQLFAPRCQGCQ---GPILDNYIS 371

  Fly   771 WGDVHWHASCFVCAGVQCSKPLIGGRFCVKENMPFC 806
            .....||..||||.  :|..|..||.|...|..|.|
  Rat   372 ALSALWHPDCFVCR--ECLAPFSGGSFFEHEGRPLC 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 21/56 (38%)
LIM2_Testin_like 691..748 CDD:188727 19/56 (34%)
LIM 755..810 CDD:295319 20/53 (38%)
Tgfb1i1XP_006230411.1 Paxillin <69..>118 CDD:281527 9/48 (19%)
LIM1_Paxillin_like 240..292 CDD:259830 21/57 (37%)
LIM2_Paxillin_like 299..350 CDD:188723 17/53 (32%)
LIM3_Paxillin 358..410 CDD:188793 20/53 (38%)
LIM4_Leupaxin 417..468 CDD:188796
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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