DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tes and LIMD2

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_085053.1 Gene:LIMD2 / 80774 HGNCID:28142 Length:127 Species:Homo sapiens


Alignment Length:54 Identity:15/54 - (27%)
Similarity:26/54 - (48%) Gaps:1/54 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   682 RDLAIRLKIPR-CRACDELIFTKEYTAAEEATFHIKHFCCYQCDEPLAGQQYIA 734
            :..::|.::.. |.||.:.::..|...|::..||...|||..|...|:...|.|
Human    28 KSFSLRAQVKETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAA 81

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 0/1 (0%)
LIM2_Testin_like 691..748 CDD:188727 14/45 (31%)
LIM 755..810 CDD:295319
LIMD2NP_085053.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
LIM_Eplin_like_1 40..92 CDD:188870 14/42 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158512
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

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