DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tes and TRIP6

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_003293.2 Gene:TRIP6 / 7205 HGNCID:12311 Length:476 Species:Homo sapiens


Alignment Length:531 Identity:126/531 - (23%)
Similarity:174/531 - (32%) Gaps:167/531 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   350 PQPPMTP--IKSPPGTPFNSPLPLKNPVQIRMGAQMRQDTPMRRVKFGGVSTIVYDCGLPANTDY 412
            |:|...|  ...|.|||  .|.|..       ||.::   |..||.|         |.||:...|
Human    12 PEPARAPQGRAIPRGTP--GPPPAH-------GAALQ---PHPRVNF---------CPLPSEQCY 55

  Fly   413 -------DRDPVFA------QILQAEPLKHAFQEARAGRAPSSVVISNIPAPVASLAELRGLN-- 462
                   ||.|.:.      |..|..|..      |.|..|.| :.:.|....::||||.|..  
Human    56 QAPGGPEDRGPAWVGSHGVLQHTQGLPAD------RGGLRPGS-LDAEIDLLSSTLAELNGGRGH 113

  Fly   463 ---------------PATRAQLQSVGLDKNMLQSAVSNAPYYDRLFRSLHDKGISHD-----QCH 507
                           ||.|     .|..|....|.:..:||......|.........     |..
Human   114 ASRRPDRQAYEPPPPPAYR-----TGSLKPNPASPLPASPYGGPTPASYTTASTPAGPAFPVQVK 173

  Fly   508 LLQPMKQVHDWLLDDDQLLDEIDKVFADMANG-CKDISYPKPSLGEL--PTSQSSDSGFHS-KPP 568
            :.||::....            .:..|..|:| .....:|.|..||:  |       |:.| :.|
Human   174 VAQPVRGCGP------------PRRGASQASGPLPGPHFPLPGRGEVWGP-------GYRSQREP 219

  Fly   569 TPGYGSEDL----TAGQGRFA----SIP---------------GIEDMNMYPSCAGMPEQFQQLR 610
            .||...|..    .||:||..    .:|               .:.|||..||    .|.|.|  
Human   220 GPGAKEEAAGVSGPAGRGRGGEHGPQVPLSQPPEDELDRLTKKLVHDMNHPPS----GEYFGQ-- 278

  Fly   611 LHGDEASGKNSTRTILCADCNQPIAMGEVA--VKADRAGKEIAWHPGCFKCITCRELLADLVYFF 673
                            |..|.:.: :|:.|  |..||     .:|.|||.|.|||..|....::.
Human   279 ----------------CGGCGEDV-VGDGAGVVALDR-----VFHVGCFVCSTCRAQLRGQHFYA 321

  Fly   674 HQGQVFCGRDLAIRLKIPRCRACDELIFTKEYTAAEEATFHIKHFCCYQCDEPLAGQQYIADEKS 738
            .:.:.:|.......|:  :|..|.:.|..:...|..:| :|...|.|..|...|.|..:..|..|
Human   322 VERRAYCEGCYVATLE--KCATCSQPILDRILRAMGKA-YHPGCFTCVVCHRGLDGIPFTVDATS 383

  Fly   739 NMPLCLLCYDRLFAVRCQRCKVAIGPADQG------VAWGDVHWHASCFVC--AGVQCSK----- 790
            .:. |:..:.|.||.||..|..||.| :.|      :...|..:|..|:.|  .|:..|.     
Human   384 QIH-CIEDFHRKFAPRCSVCGGAIMP-EPGQEETVRIVALDRSFHIGCYKCEECGLLLSSEGECQ 446

  Fly   791 ---PLIGGRFC 798
               ||.|...|
Human   447 GCYPLDGHILC 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 17/58 (29%)
LIM2_Testin_like 691..748 CDD:188727 14/56 (25%)
LIM 755..810 CDD:295319 16/60 (27%)
TRIP6NP_003293.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..93 29/108 (27%)
Atrophin-1 <8..251 CDD:331285 66/290 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..253 32/168 (19%)
LIM1_TRIP6 279..332 CDD:188736 17/58 (29%)
LIM 339..398 CDD:295319 17/60 (28%)
LIM3_Zyxin_like 399..461 CDD:188743 16/60 (27%)
Interaction with MAGI1 and PTPN13. /evidence=ECO:0000269|PubMed:19017743 469..476
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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