DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tes and prickle3

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:XP_698649.4 Gene:prickle3 / 570116 ZFINID:ZDB-GENE-081105-86 Length:783 Species:Danio rerio


Alignment Length:325 Identity:114/325 - (35%)
Similarity:160/325 - (49%) Gaps:54/325 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   512 MKQVHDW----LLDDDQLLDEIDKVFADMANGC--KDISYPKPSLGELPTSQSSDSGFHSKPP-- 568
            ||.|.|:    :.|||              :||  ::.::..|.:......|........|.|  
Zfish    69 MKLVSDFQRHSISDDD--------------SGCASEEYAWVPPGIKPEQVYQYYSCIPEDKVPYV 119

  Fly   569 -TPG--YGSEDLTAGQGRFASIPGIEDMNMYPSCAGM-PEQFQQLRLHGDEASGKNSTRTI---- 625
             :||  |..:.|      ...:|..:....|  |..: .|:.::|||...:...:|..|.|    
Zfish   120 NSPGERYRIKQL------LHQLPAHDSEPQY--CNSLDEEEKKELRLFSQQRKRENLGRGIVRLF 176

  Fly   626 -------LCADCNQPIAMGEVAVKADRAGKEIAWHPGCFKCITCRELLADLVYFFHQGQVFCGRD 683
                   :|..|.:.|..|::||.|.|||....|||.||:|.:|.|||.||:||:..|.::|||.
Zfish   177 PVTMTGAICQQCGRQICGGDIAVFASRAGHGSCWHPQCFQCASCNELLVDLIYFYQDGHIYCGRH 241

  Fly   684 LAIRLKIPRCRACDELIFTKEYTAAEEATFHIKHFCCYQCDEPLAGQQYIADEKSNMPLCLLCYD 748
            .|..:| |||:||||:||..|.|.||...:|:|||||::|:..|.||:||..|  :.|.|..||:
Zfish   242 HAEHIK-PRCQACDEIIFADECTEAEGRHWHMKHFCCFECEAALGGQRYIMRE--SRPYCCRCYE 303

  Fly   749 RLFAVRCQRCKVAIGPADQG-VAWGDVHWHAS--CFVCAGVQCSKPLIGGRFCVKENMPFCSPTC 810
            .|:|..|..|...|| .||| :.:...|||||  ||.||  .|..||:|..|..:..:.|||.:|
Zfish   304 SLYAEYCDTCGEHIG-IDQGQMTYEGQHWHASEQCFCCA--CCRLPLLGRPFLPRGGLIFCSRSC 365

  Fly   811  810
            Zfish   366  365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 28/56 (50%)
LIM2_Testin_like 691..748 CDD:188727 29/56 (52%)
LIM 755..810 CDD:295319 24/57 (42%)
prickle3XP_698649.4 PET_Prickle 81..177 CDD:193602 23/117 (20%)
LIM1_Prickle 185..243 CDD:188799 28/57 (49%)
LIM2_Prickle 248..303 CDD:188802 29/56 (52%)
LIM3_Prickle 308..366 CDD:188804 25/61 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D422310at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.