DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tes and lpxn

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:XP_689239.4 Gene:lpxn / 560743 ZFINID:ZDB-GENE-081105-159 Length:405 Species:Danio rerio


Alignment Length:317 Identity:84/317 - (26%)
Similarity:120/317 - (37%) Gaps:59/317 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   511 PMKQVHDWLLDDDQLLDEIDKVFADMANGCKDISYPKPSLGELP----------TSQSSDSGF-- 563
            |...|...|:.......|:|.:..|:.....::|.|.||....|          |.::.:||.  
Zfish    61 PTAPVEASLMSPRTATRELDSLMNDLLGLDLEVSEPAPSSNPPPLARKSIKAKTTEETGESGSGR 125

  Fly   564 ---HSKPPTPGYGSEDLTAGQGRFASIPGIEDMNMYPSCAGMPEQFQQLRLHGDEASGKNSTRTI 625
               ..||..|.. ||..:.|      :..|:|:     ...:....:::   |...:.|..    
Zfish   126 QEGDRKPQHPPL-SEKFSKG------VDAIDDL-----LGSLSSDMEKM---GVRTAAKGH---- 171

  Fly   626 LCADCNQPIAMGEVAVKADRAGKEI-----AWHPGCFKCITCRELLADLVYFFHQGQVFCGRDLA 685
             ||.|.:.|           |||.|     .|||..|.|..|||.|....:|...|:.:|.:|..
Zfish   172 -CASCGKCI-----------AGKMITALGQVWHPEHFVCSACREELGTCGFFERDGKPYCEKDYQ 224

  Fly   686 IRLKIPRCRACDELIFTKEYTAAEEATFHIKHFCCYQCDEPLAGQQYIADEKSNMPLCLLCYDRL 750
             :|..|||..|...| |:....|.:.|:|.:||.|..|.:....:.|:  |:...|.|...:..|
Zfish   225 -KLFSPRCAYCKGPI-TQNILTAMDQTWHPEHFFCCHCGDLFGPEGYL--ERDGKPYCSRDFYCL 285

  Fly   751 FAVRCQRCKVAIGPADQGVAWGDVHWHASCFVCAGVQCSKPLIGGRFCVKENMPFCS 807
            ||.:|..|...:.......|.|.  ||..||||:  .|.||...|.|......|.||
Zfish   286 FAPKCSGCGEPVKENYLSAANGT--WHPDCFVCS--DCLKPFTDGCFLELNGRPLCS 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 20/61 (33%)
LIM2_Testin_like 691..748 CDD:188727 17/56 (30%)
LIM 755..810 CDD:295319 18/53 (34%)
lpxnXP_689239.4 LIM1_Paxillin_like 172..224 CDD:259830 21/62 (34%)
LIM2_Leupaxin 231..282 CDD:188792 15/53 (28%)
LIM3_Leupaxin 290..342 CDD:188794 18/53 (34%)
LIM4_Leupaxin 349..400 CDD:188796
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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