DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tes and prickle1b

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_001025269.1 Gene:prickle1b / 556148 ZFINID:ZDB-GENE-030131-2152 Length:872 Species:Danio rerio


Alignment Length:317 Identity:111/317 - (35%)
Similarity:150/317 - (47%) Gaps:57/317 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   535 DM-ANGCKDISYPKPSLGELPTSQSSDSGFHSKPPT---PGYGSEDLTAGQGRFASIPGIEDMNM 595
            || :.|.|...:.:.|      :...|||...:..|   ||..:|.:   |..|:.:|  |:...
Zfish    26 DMDSRGAKAFGFQRSS------TSDDDSGCALEEYTWVPPGLRAEQV---QIYFSCLP--EEKVP 79

  Fly   596 YPSCAGMPEQFQQL-----------------------RLH------GDEASGKNSTRTI------ 625
            |.:..|...:.:||                       .||      ..||.|:.:.:.:      
Zfish    80 YVNSPGEKHRIRQLLYQLPPHDNEIRYCQSLSDEERRELHMFSMQRKKEALGRGTPKLLPRALQH 144

  Fly   626 LCADCNQPIAMGEVAVKADRAGKEIAWHPGCFKCITCRELLADLVYFFHQGQVFCGRDLAIRLKI 690
            .|..|.:.|..||:||.|.|||....|||.||.|.||.|||.||:||:|.|.:.|||..|..|| 
Zfish   145 NCEHCKENINGGEMAVFASRAGPGPCWHPACFTCYTCHELLVDLIYFYHNGNIHCGRHHAELLK- 208

  Fly   691 PRCRACDELIFTKEYTAAEEATFHIKHFCCYQCDEPLAGQQYIADEKSNMPLCLLCYDRLFAVRC 755
            |||.||||:||..|.|.||...:|:|||.|::|:..|.||:||.  |...|.|..|::.|:|..|
Zfish   209 PRCSACDEIIFADECTEAEGRHWHMKHFSCFECETILGGQRYIM--KDGRPFCCGCFESLYAEYC 271

  Fly   756 QRCKVAIGPADQGVAWGDVHWHAS--CFVCAGVQCSKPLIGGRFCVKENMPFCSPTC 810
            :.|...||.....:.:..|||||:  ||.||  ||...|:|..|..|:...:||..|
Zfish   272 EACGENIGVDHAQMTYEGVHWHATDKCFCCA--QCKTSLLGCPFLPKDGRIYCSKDC 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 31/56 (55%)
LIM2_Testin_like 691..748 CDD:188727 28/56 (50%)
LIM 755..810 CDD:295319 21/56 (38%)
prickle1bNP_001025269.1 PET_Prickle 43..139 CDD:193602 20/100 (20%)
LIM1_Prickle 146..204 CDD:188799 31/57 (54%)
LIM2_Prickle 209..264 CDD:188802 28/56 (50%)
LIM3_Prickle 269..327 CDD:188804 22/60 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594460
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D422310at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.750

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