DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tes and lmo7a

DIOPT Version :10

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:XP_021334325.1 Gene:lmo7a / 553341 ZFINID:ZDB-GENE-030219-74 Length:1893 Species:Danio rerio


Alignment Length:351 Identity:66/351 - (18%)
Similarity:122/351 - (34%) Gaps:113/351 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 KNPVQIRMGA----QMRQDTPMRRVKF-------GGVSTIVYDCGLPANTDYDRDPVFAQILQAE 425
            |||...|..|    ::.:.:.:..:|:       ||:|.:        |.||.::|:....|:.:
Zfish  1640 KNPQMQRKQAASELELERRSILNAMKYRNPERASGGLSEV--------NRDYQKEPLTQSELERQ 1696

  Fly   426 PLKHAFQEARAGRAPSSVVISNIPAPVASLAELRGLNPATRAQLQSVGLDKNMLQSAVSNAPYYD 490
            .:                           |.|:|        :..|:..|.:.::.:.|:.    
Zfish  1697 QI---------------------------LQEMR--------KKTSLNTDNSWIRQSTSSV---- 1722

  Fly   491 RLFRSLHDKGISHDQCHLLQPMKQVHDWLLDDDQLLDEIDKVFADMANGCKDISYPKPSLGELPT 555
                                |.|:..|..:...:.||.:|:              |:.|.....:
Zfish  1723 --------------------PAKEPIDLPIRRGESLDNLDE--------------PRSSWRSSWS 1753

  Fly   556 SQSSDSGF--HSKPPTPGYGSEDLTAGQGRFASIPGIEDMNMYPSCAGMPEQFQQLRL--HGDEA 616
            :.:|.|..  :|:|.:...||....||:...|::...:.|:........|....:.|.  .....
Zfish  1754 TSNSTSSIPDYSRPHSALSGSTLQPAGRPGSATMQASQSMSSLRQSTSTPANPPEPRAPQRNRSV 1818

  Fly   617 SGKNSTRTILCADCNQPIAMGEVAVKADRAGKEIAWHPGCFKCITCRELLADLVYFFHQGQVFCG 681
            ||:.     :|:.|:.|:..| .|:..:..|  :.:|..||||..||   :||      |....|
Zfish  1819 SGRK-----ICSFCDTPLGKG-AAMIIESLG--LCYHLTCFKCSDCR---SDL------GGSQAG 1866

  Fly   682 RDLAIRLKIPRCRACDELIFTKEYTA 707
            .::.||.:...|..|...:.|.:.||
Zfish  1867 AEVRIRNQQLYCNVCYMRLKTGQPTA 1892

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 17/56 (30%)
LIM2_Testin_like 691..748 CDD:188727 5/17 (29%)
LIM 755..810 CDD:413332
lmo7aXP_021334325.1 CH_LMO7 14..129 CDD:409126
DUF4757 239..>311 CDD:464950
DUF4757 733..881 CDD:464950
PTZ00108 <809..1096 CDD:240271
COG3975 <1134..1227 CDD:443174
PDZ 1186..1256 CDD:214570
CCDC66 <1396..1484 CDD:434558
LIM 1824..1882 CDD:259829 20/69 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.