DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tes and lmo7a

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:XP_021334325.1 Gene:lmo7a / 553341 ZFINID:ZDB-GENE-030219-74 Length:1893 Species:Danio rerio


Alignment Length:351 Identity:66/351 - (18%)
Similarity:122/351 - (34%) Gaps:113/351 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 KNPVQIRMGA----QMRQDTPMRRVKF-------GGVSTIVYDCGLPANTDYDRDPVFAQILQAE 425
            |||...|..|    ::.:.:.:..:|:       ||:|.:        |.||.::|:....|:.:
Zfish  1640 KNPQMQRKQAASELELERRSILNAMKYRNPERASGGLSEV--------NRDYQKEPLTQSELERQ 1696

  Fly   426 PLKHAFQEARAGRAPSSVVISNIPAPVASLAELRGLNPATRAQLQSVGLDKNMLQSAVSNAPYYD 490
            .:                           |.|:|        :..|:..|.:.::.:.|:.    
Zfish  1697 QI---------------------------LQEMR--------KKTSLNTDNSWIRQSTSSV---- 1722

  Fly   491 RLFRSLHDKGISHDQCHLLQPMKQVHDWLLDDDQLLDEIDKVFADMANGCKDISYPKPSLGELPT 555
                                |.|:..|..:...:.||.:|:              |:.|.....:
Zfish  1723 --------------------PAKEPIDLPIRRGESLDNLDE--------------PRSSWRSSWS 1753

  Fly   556 SQSSDSGF--HSKPPTPGYGSEDLTAGQGRFASIPGIEDMNMYPSCAGMPEQFQQLRL--HGDEA 616
            :.:|.|..  :|:|.:...||....||:...|::...:.|:........|....:.|.  .....
Zfish  1754 TSNSTSSIPDYSRPHSALSGSTLQPAGRPGSATMQASQSMSSLRQSTSTPANPPEPRAPQRNRSV 1818

  Fly   617 SGKNSTRTILCADCNQPIAMGEVAVKADRAGKEIAWHPGCFKCITCRELLADLVYFFHQGQVFCG 681
            ||:.     :|:.|:.|:..| .|:..:..|  :.:|..||||..||   :||      |....|
Zfish  1819 SGRK-----ICSFCDTPLGKG-AAMIIESLG--LCYHLTCFKCSDCR---SDL------GGSQAG 1866

  Fly   682 RDLAIRLKIPRCRACDELIFTKEYTA 707
            .::.||.:...|..|...:.|.:.||
Zfish  1867 AEVRIRNQQLYCNVCYMRLKTGQPTA 1892

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 17/56 (30%)
LIM2_Testin_like 691..748 CDD:188727 5/17 (29%)
LIM 755..810 CDD:295319
lmo7aXP_021334325.1 CH 17..128 CDD:237981
DUF4757 239..>311 CDD:318215
DUF4757 733..881 CDD:318215
TOP2c <809..1096 CDD:330395
PDZ 1184..1245 CDD:238080
Neuromodulin_N <1396..1506 CDD:331332
LIM 1824..1882 CDD:259829 20/69 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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