DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tes and Prickle3

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_001277553.1 Gene:Prickle3 / 54630 MGIID:1859635 Length:624 Species:Mus musculus


Alignment Length:812 Identity:155/812 - (19%)
Similarity:212/812 - (26%) Gaps:476/812 - (58%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SRREQLKRSKLGHEAGA-GAPCAECKDKCPGLDLHFWRKVCRNCKCPKIQH---VCPDD------ 78
            |||.:..|:....|..| |.||..|:::|||..||.|||:|::||||:.:|   ..|.|      
Mouse     6 SRRRRSGRAPPEAEDPARGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVRTVPVDLERIMC 70

  Fly    79 ------------DDATGWAQFEILGQIRAKPAYIKIKALASQPVQLEWVPPNAAPDVVTDYMEKL 131
                        ||.:|.|..|                       ..||||...|:.|..:...|
Mouse    71 RLISDFQRHSISDDDSGCASEE-----------------------YAWVPPGLKPEQVYQFFSCL 112

  Fly   132 GTAQIPVAGSDAALKRKMQLELQVPPHDLDAALCDGLTETEAIQLQQYVQKLREQCVGQGVVVRL 196
            ...::|...|.....|..||..|:||||.:|..|..|.|.|..:|:                   
Mouse   113 PEDKVPYVNSPGEKYRIKQLLHQLPPHDSEAQYCTALEEEEKKELR------------------- 158

  Fly   197 GDRLNHAQVEHVAPALMPTQEAQQTWQSLGLMPVADDTLNELLANPKVAQALASPASAHPKLLVA 261
                                                                            |
Mouse   159 ----------------------------------------------------------------A 159

  Fly   262 FSEPLCESTAQFEENGALRAQTREKLLGISKPALLSLVTHGIVYDKVLGILQEKKLNISRDPKLG 326
            ||:                                                |.|:.|:.|     
Mouse   160 FSQ------------------------------------------------QRKRENLGR----- 171

  Fly   327 PIAEFRKEYVNNPQFRAEINTICPQPPMTPIKSPPGTPFNSPLPLKNPVQIRMGAQMRQDTPMRR 391
                                                                             
Mouse   172 ----------------------------------------------------------------- 171

  Fly   392 VKFGGVSTIVYDCGLPANTDYDRDPVFAQILQAEPLKHAFQEARAGRAPSSVVISNIPAPVASLA 456
                  :|:                                                        
Mouse   172 ------ATV-------------------------------------------------------- 174

  Fly   457 ELRGLNPATRAQLQSVGLDKNMLQSAVSNAPYYDRLFRSLHDKGISHDQCHLLQPMKQVHDWLLD 521
                                              |:|                            
Mouse   175 ----------------------------------RIF---------------------------- 177

  Fly   522 DDQLLDEIDKVFADMANGCKDISYPKPSLGELPTSQSSDSGFHSKPPTPGYGSEDLTAGQGRFAS 586
                                                         |.|                 
Mouse   178 ---------------------------------------------PVT----------------- 180

  Fly   587 IPGIEDMNMYPSCAGMPEQFQQLRLHGDEASGKNSTRTILCADCNQPIAMGEVAVKADRAGKEIA 651
            |.|                                   .:|.:|.:.|..|::||.|.|||....
Mouse   181 ITG-----------------------------------AICEECGKQIGGGDIAVFASRAGLGAC 210

  Fly   652 WHPGCFKCITCRELLADLVYFFHQGQVFCGRDLAIRLKIPRCRACDELIFTKEYTAAEEATFHIK 716
            |||.||.|.||:|||.||:||:|.|:|:|||..|..|: |||:||||:||:.|.|.||...:|:.
Mouse   211 WHPQCFVCTTCQELLVDLIYFYHAGKVYCGRHHAECLR-PRCQACDEIIFSPECTEAEGRHWHMG 274

  Fly   717 HFCCYQCDEPLAGQQYIADEKSNMPLCLLCYDRLFAVRCQRCKVAIGPADQG-VAWGDVHWHAS- 779
            ||||::|:..|.||:|:.  :.:.|.|..||:...|..|..|...|| .||| :|:...||||| 
Mouse   275 HFCCFECEASLGGQRYVM--RQSRPHCCACYEARHAEYCDGCGEHIG-LDQGQMAYEGQHWHASD 336

  Fly   780 -CFVCAGVQCSKPLIGGRFCVKENMPFCSPTC 810
             ||.|:  :||:||:|..|..:..:.|||..|
Mouse   337 RCFCCS--RCSRPLLGRPFLPRRGLIFCSRAC 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604 23/86 (27%)
LIM1_Testin_like 627..684 CDD:188726 31/56 (55%)
LIM2_Testin_like 691..748 CDD:188727 26/56 (46%)
LIM 755..810 CDD:295319 25/57 (44%)
Prickle3NP_001277553.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 7/19 (37%)
PET_Prickle 82..178 CDD:193602 38/488 (8%)
LIM1_Prickle 186..244 CDD:188799 31/57 (54%)
LIM2_Prickle 249..304 CDD:188802 26/56 (46%)
LIM3_Prickle 309..367 CDD:188804 26/61 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 371..617
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 49 1.000 Domainoid score I11711
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D422310at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.