DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tes and fhl2b

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_001006028.2 Gene:fhl2b / 450007 ZFINID:ZDB-GENE-041010-121 Length:279 Species:Danio rerio


Alignment Length:181 Identity:52/181 - (28%)
Similarity:83/181 - (45%) Gaps:12/181 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   627 CADCNQPIAMGEVAVKADRAGKEIAWHPGCFKCITCRELLADLVYFFHQGQVFCGRDLAIRLKIP 691
            |.:|.:||...    ..|.:.|:..||..||.|..|...|.|..:.....|:.|....:.... .
Zfish    40 CEECKKPIGCN----SRDLSYKDRHWHDDCFHCFKCHRSLVDKPFSTKDEQLLCTECYSNEYS-S 99

  Fly   692 RCRACDELIFTKEYTAAEEA-TFHIKHFCCYQCDEPLAGQQYIADEKSNMPLCLLCYDRLFAVRC 755
            :|..|.:.|.........:. ::|...|.|.:|.:|:..:.:|..:.||  .|:.||::.||::|
Zfish   100 KCFECKKTIMPGSRKMEHKGNSWHETCFTCQRCQQPIGTKSFIPKDNSN--YCVPCYEKQFALQC 162

  Fly   756 QRCKVAIGPADQGVAWGDVHWHASCFVCAGVQCSKPLIGGRFCVKENMPFC 806
            .:||..|  ...||.:.|..||..||:|.|  |.:.|.|.||..:::.|:|
Zfish   163 VQCKKPI--TTGGVTYHDQPWHKDCFLCTG--CKQQLSGQRFTSRDDFPYC 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 16/56 (29%)
LIM2_Testin_like 691..748 CDD:188727 13/57 (23%)
LIM 755..810 CDD:295319 20/52 (38%)
fhl2bNP_001006028.2 LIM <7..33 CDD:295319
LIM 36..97 CDD:295319 16/60 (27%)
LIM 101..157 CDD:295319 14/57 (25%)
LIM3_Fhl2 162..218 CDD:188815 20/52 (38%)
LIM4_FHL2 221..278 CDD:188817
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.