DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tes and smash

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_001246912.1 Gene:smash / 40583 FlyBaseID:FBgn0263346 Length:1541 Species:Drosophila melanogaster


Alignment Length:689 Identity:139/689 - (20%)
Similarity:236/689 - (34%) Gaps:209/689 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 VQLEWVPPNAAPDVVTDYMEKLGTAQIPVAGSDAALKRKMQLELQVPPHDLDAALCD-------- 166
            ::|...||   ||:          ||:        |:.:.:||.|:   .:.|.|||        
  Fly   948 LELTVAPP---PDM----------AQL--------LQEERRLEKQL---YIKAGLCDSSDTGESR 988

  Fly   167 --GLTETEAIQLQQYVQKLREQCVGQGVVVRLGDRLNHAQVEHVAPALMP----TQEAQQTWQSL 225
              |::|..:.|..::.....|:              |..|.|...|.|.|    .|..:..:|:.
  Fly   989 DSGVSENHSRQSSEHYTNSSEE--------------NDTQSEATPPPLPPPPSTAQVGEVIYQNE 1039

  Fly   226 GLMPVADDTLNELLANPKVAQALASPASAHPKLLVAFSEPLCESTA-----------QFEENGAL 279
            .|:......|..:..|...:...::.|:|      |.::.|.|:||           :..|.|.:
  Fly  1040 SLLAAQTPLLQTVKGNSAESWTESATAAA------AATQSLSEATATANAKMQSIEDKIREQGEM 1098

  Fly   280 RAQTREKLLGISKPALLSLVTHGIVYDKVL--GILQEKKLNISRDPK--------LGPIAEFRKE 334
            ....|| ||..|:..|.....:.::.:.:.  .:....|:.:|.:.:        ||        
  Fly  1099 LRVERE-LLHFSQEELKRQRENLVLRENIARRELQHGAKMLMSNNRRSLQDLHHGLG-------- 1154

  Fly   335 YVNNPQFRAEINTICPQPPM-TPIKSPPGTP----FNSPLPLKNPVQIRMGAQMRQDTPMRRVKF 394
             :.|....|.      |||. ..::.||..|    .|.|   :...|:.:.|..:.||..|:   
  Fly  1155 -IGNGMLSAF------QPPQHHQVQMPPPHPQQIYANVP---QQQQQMVLHAYHQMDTDYRK--- 1206

  Fly   395 GGVSTI--VYDCGLPANTDYDRDPVFAQILQA-----EPLKHAFQEARAGRAP---SSVVISNIP 449
             .:|.:  ..:|.:...|...: |:.|..|.|     ||........|...||   |.|.|:..|
  Fly  1207 -SMSDLNEFSNCLILPPTPPTK-PLRAMQLNANGHGLEPDYAVSTRQRQPPAPYGGSLVKIAGAP 1269

  Fly   450 APVASLAELRGLN--------PATRAQ----LQSVGLDKNMLQSAVSNAPYYDRLF----RSLHD 498
            .|    ..|.|..        ||...|    |.::..:..:..||.....|.|...    |..:|
  Fly  1270 MP----PRLPGQGYPIQAPTAPAYHHQSAQNLSNMSRNTLLALSATPKPKYADGWVQVQQRKSYD 1330

  Fly   499 KGISHDQCHLL---QPMKQVHD----------WLLD--DDQLLDEIDKVFADMANGCKDISYPKP 548
            ...:.|...|.   |..|.:.|          |||.  :.:.::::::         :.|...| 
  Fly  1331 SQQTSDAAWLAAQQQKRKSMPDYGGALYNNNHWLLQEAEQRRIEQLNR---------RSIPASK- 1385

  Fly   549 SLGE-LPTS--QSSDSGFHSKPPTPGYGSEDLTAGQGRFASIPGIEDMNMYPSCAGMPEQFQQLR 610
            |:|: ||.|  |:......||    |.|........|.::.:.|   .|:|       :|.||.:
  Fly  1386 SMGKPLPDSIIQTLTERVQSK----GIGDRKRFDSNGNYSQVNG---NNIY-------QQQQQQK 1436

  Fly   611 -------LHGDEASGKNSTRTI----LCADCNQPIAMGEVAVKADRAGKE-------IAWHPGCF 657
                   ::|:.:.|:....::    .|:.|..  .:|::.......|..       :.:|..||
  Fly  1437 NVTNGSSINGNSSQGQEKVLSVSGKKKCSHCGD--ELGKLCYYVGCRGAAMIIESLLLFYHINCF 1499

  Fly   658 KCITCRELLADLVYFFHQGQVFCGRDLAIRLKIPRCRAC 696
            ||..|...|.|.:.         |.|:.:|.....|:.|
  Fly  1500 KCCVCHVQLGDGLN---------GTDVRVRNHKLHCQNC 1529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604 19/96 (20%)
LIM1_Testin_like 627..684 CDD:188726 13/63 (21%)
LIM2_Testin_like 691..748 CDD:188727 2/6 (33%)
LIM 755..810 CDD:295319
smashNP_001246912.1 DUF4757 14..152 CDD:292571
LIM <1494..1530 CDD:278823 13/45 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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