DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tes and prickle1a

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_899185.2 Gene:prickle1a / 368249 ZFINID:ZDB-GENE-030724-5 Length:793 Species:Danio rerio


Alignment Length:310 Identity:108/310 - (34%)
Similarity:150/310 - (48%) Gaps:59/310 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   547 KPSLG-ELPTSQSSDSGF----HSKPPTPGYGSEDLTAGQGRFASIPGIEDMNMYPSCAGMPEQF 606
            |.:|| :..::...|||.    ::..| ||...|.:..   .|:.:|  ||...|.:..|..::.
Zfish    17 KLTLGFQRSSTSDDDSGCALEEYAWVP-PGLRPEQVAL---YFSCLP--EDKVPYVNSPGEKQRI 75

  Fly   607 QQL-----------------------RLH------GDEASGKNS----TRTI---LCADCNQPIA 635
            :||                       .||      ..||.|:.:    .||:   .|..|.:.::
Zfish    76 KQLLYQLPPHDNEVRYCQSLSEEEKKELHMFSIQRKKEALGRGTLKILPRTVHHAACEHCGERLS 140

  Fly   636 MGEVAV---KADRAGKEIAWHPGCFKCITCRELLADLVYFFHQGQVFCGRDLAIRLKIPRCRACD 697
            .||:||   :|..||:  .|||.||.|.||.|||.||:||:|.|:|.|||..|..|| |||.:||
Zfish   141 GGEMAVCVSRAAAAGQ--CWHPACFTCSTCSELLVDLIYFYHDGKVHCGRHHAELLK-PRCSSCD 202

  Fly   698 ELIFTKEYTAAEEATFHIKHFCCYQCDEPLAGQQYIADEKSNMPLCLLCYDRLFAVRCQRCKVAI 762
            |:||..|.|.||...:|:|||.|.:|:..|.||:||.  |...|.|..|:..|:|..||.|...|
Zfish   203 EIIFADECTEAEGRHWHMKHFSCSECEVILGGQRYIM--KDGRPFCCGCFQSLYAEYCQACAQHI 265

  Fly   763 GPADQGVAWGDVHWHA--SCFVCAGVQCSKPLIGGRFCVKENMPFCSPTC 810
            |.....:.:..:||||  :||.||  ||...|:|..|..::...:||..|
Zfish   266 GVDHAQMTYDGLHWHATDACFSCA--QCKSSLLGCPFLPRQGRIYCSKAC 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 30/59 (51%)
LIM2_Testin_like 691..748 CDD:188727 27/56 (48%)
LIM 755..810 CDD:295319 20/56 (36%)
prickle1aNP_899185.2 PET_Prickle 28..124 CDD:193602 20/101 (20%)
LIM1_Prickle 132..191 CDD:188799 30/60 (50%)
LIM2_Prickle 196..251 CDD:188802 27/56 (48%)
LIM3_Prickle 256..314 CDD:188804 21/60 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594459
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D422310at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.750

Return to query results.
Submit another query.