DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tes and Fblim1

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:XP_008762495.1 Gene:Fblim1 / 362650 RGDID:1359551 Length:552 Species:Rattus norvegicus


Alignment Length:418 Identity:86/418 - (20%)
Similarity:152/418 - (36%) Gaps:88/418 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   461 LNPATRAQLQSVGLDKNM---LQSAVSNAPYYDRLFRSLHDKGISHDQCHLLQPMKQVHDWLLDD 522
            |.|..|..||..|...|.   |...:|.:...:.:..|..:|.::......|.|.::       |
  Rat   142 LGPRDRGSLQLSGAGLNFGPCLPVGISISAPQELIMASKQEKRVASSVFITLAPPRR-------D 199

  Fly   523 DQLLDEIDKVFAD--------------------------MANGCKDISYPK--PSLG----ELPT 555
            ..:.:|:.:...:                          ..:|....|.|:  |.|.    .||.
  Rat   200 VAVTEEVTQAVCEARRARPWETLPTKTPGAAVGRSPKTWTPSGRTTASLPEVPPQLSNGGCSLPP 264

  Fly   556 SQSSDSGFHSKPPTPGYGSEDLTAGQGRFASIPG------IEDMNMYP---------SCAGMPEQ 605
            ...::......||.|...|..|...:.....:||      :|.:::.|         ...|...|
  Rat   265 PPLNEEDLDLLPPPPPPPSAYLPLPEEEPPVVPGSSLISDLEQLHLPPPPPPPLLQAPSKGSSVQ 329

  Fly   606 FQQLRLHGDEAS-----------GKNSTRTILCADCNQPIAMGEVAVKADRAGKEIAWHPGCFKC 659
            .|.:::...|..           .:....|.:|..|::|::..|:||:|.:.    .:|..||.|
  Rat   330 PQPVQVRPSEEELPPPPEEPVTLPEREASTDVCGFCHKPVSPRELAVEAMKR----QYHAQCFTC 390

  Fly   660 ITCRELLADLVYFFHQGQVFCGRDLAIRLKIPRCRACDELIFTKEYTAAEEATFHIKHFCCYQCD 724
            .|||..||...::...|:..|  :...:..:.:|..|.|::......|..:| ||...|.|..|.
  Rat   391 RTCRRQLAGQRFYQKDGRPLC--EPCYQDTLEKCGKCGEVVQEHVIRALGKA-FHPPCFTCVTCA 452

  Fly   725 EPLAGQQYIADEKSNMPLCLLCYDRLFAVRCQRCKVAIGPADQGVAWG----DVHWHASCFVCAG 785
            ..::.:.:..|.: |...|:..:.|.||..|..|:..|.|.|...|:.    ..::|.:|:.|. 
  Rat   453 RCISDESFALDNQ-NQVYCVTDFYRKFAPVCSICENPIIPRDGKDAFKIECMGRNFHENCYRCE- 515

  Fly   786 VQCS-----KPLIGGRFCVKENMPFCSP 808
             .||     :|...|.:.:.::: ||.|
  Rat   516 -DCSVLLSVEPTDQGCYPLNDHL-FCKP 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 18/56 (32%)
LIM2_Testin_like 691..748 CDD:188727 13/56 (23%)
LIM 755..810 CDD:295319 16/63 (25%)
Fblim1XP_008762495.1 LIM <357..415 CDD:295319 19/63 (30%)
LIM2_FBLP-1 422..474 CDD:188758 13/53 (25%)
LIM3_Zyxin_like 482..543 CDD:188743 16/63 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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