DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tes and Scel

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:XP_006252490.1 Gene:Scel / 361086 RGDID:1305102 Length:672 Species:Rattus norvegicus


Alignment Length:686 Identity:130/686 - (18%)
Similarity:218/686 - (31%) Gaps:230/686 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 ASQPVQLE---WVPP-----NAAPDVVTDYMEKLGTAQIPVAGSDAALKRKMQLELQVPPHDLDA 162
            |:.||:.:   |.||     ||.|                   |..|.:|...|...:||..   
  Rat   126 ATTPVKKKRQSWFPPPPPGHNAPP-------------------STGASRRDPPLHPPLPPKP--- 168

  Fly   163 ALCDGLTETEAIQLQQYVQKLREQCVGQGVVVRLGDRLNHA----------QVEHVAPALMPTQE 217
              |..:...:  ||:|..:::.....|     ..|:...||          .:..||.||..|.:
  Rat   169 --CSPIASPK--QLRQSHRQMHMATAG-----ACGEADRHAARNIRTEDLDDIIRVAAALQKTDK 224

  Fly   218 AQQTWQSLGLMPVADDTLNELLANPKVAQALASPASAHPKLLVAFSEPLCESTAQFEENGALRAQ 282
            .::.           |.|..:..:....|.|                           :|..||.
  Rat   225 GEEL-----------DNLIRMNKSLNRNQGL---------------------------DGLFRAN 251

  Fly   283 TREKLLGISKPALLSLVTHGIVYDK------VLGILQEKKLNISRDPKLGPIAEFRKEYVNNPQF 341
            .:.:.|.....:|.||:......|:      ..|..  ||:|...|.:.|           :...
  Rat   252 LKAQQLDKRAQSLESLIYMNTQMDRDGKGNQAFGSF--KKINQRADTERG-----------SQDQ 303

  Fly   342 RAEINTICPQPPMTPIKSPPGTPFNSPLPLKNPVQIRMGAQMRQDTPMRRVKFGGVSTIVYDCGL 406
            |:.|.|    ..|....|..|...:|.:.: :| :....|..:||       .||:..:      
  Rat   304 RSIIRT----NAMAERSSRRGKDLDSVMKI-SP-KGHESATGKQD-------LGGLINV------ 349

  Fly   407 PANTDYDRDPVFAQILQAEPLKHAFQEARAGRAPSSV--VISNIPA------------------P 451
              |.:.::.....|.|: ..:|...:..|:.:...|:  .|..:||                  |
  Rat   350 --NPETNKSMKRGQSLE-NLIKVTLEVNRSSKGGQSLDNFIKAVPATDRANQGSQGLDSLMKVTP 411

  Fly   452 VA------SLAELRGLNPATRAQLQSVG---LDK---------------NMLQSAVSNAPYYDRL 492
            .|      ||.||  :|.:.:|...:.|   |||               :.|.:::...|..:|.
  Rat   412 SANKSNQHSLDEL--VNTSPKAVKTTAGHQDLDKFIKVNADVLTNNQRNHDLDNSIRGNPTVNRC 474

  Fly   493 FRSLHD------------KGISHDQCHLLQPMKQVHDWLLDDDQLLDEIDKVFADMANGCKDISY 545
            .:| ||            :..:.||.  |:.:.:|:..:.:|..  :.:|.....:.|..:..| 
  Rat   475 DQS-HDLDNLIKVKPSALRNTNGDQD--LKGLTEVNSRVSEDKN--ERVDGQANGVTNSLRKES- 533

  Fly   546 PKPSL--GELPTSQSSDSGFHSKPP------TPGYGSEDLTAGQGRFASIPGIEDMNMYPSCAGM 602
            |:.|:  .|..||.||:||..:..|      |..|.....:...|...:|.|.....:|      
  Rat   534 PRTSVYSHETKTSLSSNSGTRNAGPKDTVVYTRTYVENSKSPKDGYQENISGKYIQTVY------ 592

  Fly   603 PEQFQQLRLHGDEASGKNSTRTILCADCNQPIAMGEVAVKADRAGKEIAWHPGCFKCITCRELLA 667
                        ..|.::.....:|..|.:|:.: |..:..|..  :|..|..||||..|:..|.
  Rat   593 ------------STSDRSVIERDMCTYCRKPLGV-ETKMILDEL--QICCHSTCFKCEICKRPLE 642

  Fly   668 DLVYFFHQGQVFCGRDLAIRLKIPRCRACDELIFTK 703
            :|.         .|..:.|..:...|..|...:..|
  Rat   643 NLQ---------AGDSIWIYRQTIHCEPCYSKVMAK 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604 18/94 (19%)
LIM1_Testin_like 627..684 CDD:188726 15/56 (27%)
LIM2_Testin_like 691..748 CDD:188727 3/13 (23%)
LIM 755..810 CDD:295319
ScelXP_006252490.1 LIM 604..662 CDD:214528 17/69 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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