DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tes and Prickle1

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_955428.1 Gene:Prickle1 / 315259 RGDID:735090 Length:831 Species:Rattus norvegicus


Alignment Length:325 Identity:111/325 - (34%)
Similarity:153/325 - (47%) Gaps:64/325 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   528 EIDKVFADMANGCKDISYPKPSLGELPTSQSSDSGF----HSKPPTPGYGSEDLTAGQGRFASIP 588
            |::...:.:|.||:..|           :...|||.    ::..| ||...|.:   |..||.:|
  Rat     4 EMEPKMSKLAFGCQRSS-----------TSDDDSGCALEEYAWVP-PGLRPEQI---QLYFACLP 53

  Fly   589 GIEDMNMYPSCAGMPEQFQQLRL----HGD-------------------------EASGKNSTRT 624
              |:...|.:..|...:.:||..    |.:                         ||.|:.:.:.
  Rat    54 --EEKVPYVNSPGEKHRIKQLLYQLPPHDNEVRYCQSLSEEEKKELQVFSAQRKKEALGRGTIKL 116

  Fly   625 I-------LCADCNQPIAMGEVAVKADRAGKEIAWHPGCFKCITCRELLADLVYFFHQGQVFCGR 682
            :       :|..|...:..|||||.|.|||..:.|||.||.|.||.|||.||:||:..|::.|||
  Rat   117 LSRAMMHAVCEQCGLQMNGGEVAVFASRAGPGVCWHPSCFVCFTCNELLVDLIYFYQDGKIHCGR 181

  Fly   683 DLAIRLKIPRCRACDELIFTKEYTAAEEATFHIKHFCCYQCDEPLAGQQYIADEKSNMPLCLLCY 747
            ..|..|| |||.||||:||..|.|.||...:|:|||||.:|:..|.||:||.  |...|.|..|:
  Rat   182 HHAELLK-PRCSACDEIIFADECTEAEGRHWHMKHFCCLECETVLGGQRYIM--KDGRPFCCGCF 243

  Fly   748 DRLFAVRCQRCKVAIGPADQGVAWGDVHWHA--SCFVCAGVQCSKPLIGGRFCVKENMPFCSPTC 810
            :.|:|..|:.|...||.....:.:...||||  :||.||  ||...|:|..|..|:...:||.||
  Rat   244 ESLYAEYCETCGEHIGVDHAQMTYDGQHWHATEACFSCA--QCKASLLGCPFLPKQGQIYCSKTC 306

  Fly   811  810
              Rat   307  306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 30/56 (54%)
LIM2_Testin_like 691..748 CDD:188727 29/56 (52%)
LIM 755..810 CDD:295319 20/56 (36%)
Prickle1NP_955428.1 PET_Prickle 22..118 CDD:193602 20/101 (20%)
LIM1_Prickle_1 126..184 CDD:188867 30/57 (53%)
LIM2_Prickle 189..244 CDD:188802 29/56 (52%)
LIM3_Prickle 249..307 CDD:188804 22/60 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 314..346
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 664..688
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 763..831
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352514
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D422310at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X39
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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