DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tes and Lpxn

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:XP_038964643.1 Gene:Lpxn / 293783 RGDID:1304981 Length:398 Species:Rattus norvegicus


Alignment Length:359 Identity:87/359 - (24%)
Similarity:127/359 - (35%) Gaps:109/359 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   518 W--LLDDDQLLDEIDKVFADMANGC------KDISYP-KPSLGELPTSQSSDSGFHSKPPTPGYG 573
            |  .|..|.||:|::         |      :|.|.| ...|.:.||.:|      ..|.||   
  Rat    10 WATFLVPDALLEELE---------CCTLQDSEDYSNPVSCCLDQQPTQES------KLPQTP--- 56

  Fly   574 SEDLTAGQGRFASI-------PGIEDMNMY-----PSCAGMP------EQFQQLRLHGDEASGKN 620
              ...:.||..:.:       ..|::.|:|     |..:.:|      .|..:|..|.:|...|.
  Rat    57 --KTLSTQGNTSPLKVQLVYTTNIQEPNVYSEVQEPKQSVLPPKTSAAAQLDELMAHLNELQAKV 119

  Fly   621 STR-------------------TIL-------------------CADCNQPIAMGEVAVKADRAG 647
            |.:                   ::|                   ||.|.:||           ||
  Rat   120 SVKADASRKPLPDKQDHKASLDSMLGGLEQELQDLGIATVPKGHCASCQKPI-----------AG 173

  Fly   648 KEI-----AWHPGCFKCITCRELLADLVYFFHQGQVFCGRDLAIRLKIPRCRACDELIFTKEYTA 707
            |.|     :|||..|.|..|:|.|....:|...|..:|.:|.. .|..|||..|...|..|..||
  Rat   174 KVIHALGQSWHPEHFVCTHCKEELGSSPFFERNGLAYCSKDYH-HLFSPRCAYCAAPITDKVLTA 237

  Fly   708 AEEATFHIKHFCCYQCDEPLAGQQYIADEKSNMPLCLLCYDRLFAVRCQRCKVAIGPADQGVAWG 772
            ..: |:|.:||.|..|.|....:.:  .||...|.|...:..:|:.:|..|...:  .:..::..
  Rat   238 MNK-TWHPEHFFCSHCGEVFGAEGF--HEKDKKPYCRKDFLAMFSPKCGGCNRPV--LENYLSAM 297

  Fly   773 DVHWHASCFVCAGVQCSKPLIGGRFCVKENMPFC 806
            :..||..||||.  .|......|.|...:..|||
  Rat   298 NTVWHPECFVCG--DCFSSFSSGSFFELDGRPFC 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 20/61 (33%)
LIM2_Testin_like 691..748 CDD:188727 19/56 (34%)
LIM 755..810 CDD:295319 14/52 (27%)
LpxnXP_038964643.1 LIM1_Leupaxin 162..216 CDD:188790 21/64 (33%)
LIM 223..274 CDD:413332 17/53 (32%)
LIM 282..334 CDD:413332 14/52 (27%)
LIM4_Paxillin_like 341..392 CDD:188725
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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