DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Tes and rga1

DIOPT Version :9

Sequence 1:	NP_611215.1	Gene:	Tes / 36965	FlyBaseID:	FBgn0034223	Length:	816	Species:	Drosophila melanogaster
Sequence 2:	NP_596743.1	Gene:	rga1 / 2541022	PomBaseID:	SPBC3F6.05	Length:	1150	Species:	Schizosaccharomyces pombe

Alignment Length:	274	Identity:	69/274 - (25%)
Similarity:	95/274 - (34%)	Gaps:	72/274 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly   546 PKPSLGELPTSQSSDSGF-HSKPPTPGYGSEDLTAGQGRFASIPGIEDMNMYPSCAGMPEQFQQL 609
            |.||........|:...| ||:..:...|:|..::...|..|.         .|...:|.| |||
pombe    27 PVPSRQNKIEENSTTKNFPHSRHTSTVAGTEGGSSLSRRHTSA---------ESRKALPNQ-QQL 81

  Fly   610 RLHG-----DEASGKNSTRTI------------LCADCNQPI------AMGEVAVKADRAGKEIA 651
            ...|     ::.|.|.|..::            :||.|.|.|      |:|.:
pombe    82 AQSGLLNKEEQQSLKRSDTSVFPKAVRKVSSSKICASCGQVISGQYVRALGNI------------ 134

  Fly   652 WHPGCFKCITCRELLADLVYFF-------HQGQVFCGRDLAIRLKIPRCRACDELIFTKEYTAAE 709
            :|..||:|..|..|:|.  .||       ::....|..|...||.: .|.:|. :.....|..|.
pombe   135 YHLECFRCHDCNSLVAS--KFFPIDDPTLNKQVPLCETDYFRRLDL-LCASCG-MALRGYYITAL 195

  Fly   710 EATFHIKHFCCYQCDEPLAGQQYIADEKSNMPLCLLCYDRLFAVRCQRCKVAIGPA--------D 766
            ...|||:||.|..| ..:.|......|......|...|..|||.||..|.   ||.        .
pombe   196 NKKFHIEHFTCSLC-YTVFGPNDSYYEYEGKVYCHYHYSTLFAARCCGCD---GPILRQFVEVYR 256

  Fly   767 QGVAWGDVHWHASC 780
            .||:   .:||..|
pombe   257 NGVS---QNWHVPC 267

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Tes	NP_611215.1	PET_testin	110..197	CDD:193604
		LIM1_Testin_like	627..684	CDD:188726	17/69 (25%)
		LIM2_Testin_like	691..748	CDD:188727	14/56 (25%)
		LIM	755..810	CDD:295319	9/34 (26%)
rga1	NP_596743.1	LIM1_Lrg1p_like	116..172	CDD:188777	17/69 (25%)
		LIM2_Lrg1p_like	180..232	CDD:188778	14/53 (26%)
		LIM	485..539	CDD:295319
		RhoGAP_fLRG1	835..1044	CDD:239862
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X39
TreeFam	0	0.000	Not matched by this tool.
	1	1.000