DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tes and pxl1

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_596112.1 Gene:pxl1 / 2540856 PomBaseID:SPBC4F6.12 Length:438 Species:Schizosaccharomyces pombe


Alignment Length:543 Identity:127/543 - (23%)
Similarity:188/543 - (34%) Gaps:180/543 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 PIAEFRKEYVNNPQFRAEINTICPQPPMTPIKSPPGTPFN-SPLPLKNPVQIRM--------GAQ 382
            ||.|.       |:|...         :|..::.|.:|.: :..||.|.|:.|:        |.:
pombe     4 PIPEL-------PRFERR---------LTGPRAAPSSPVSTNGSPLNNLVRSRLSDGALNFTGGR 52

  Fly   383 MRQDTPMRRVKFGGVSTIVYDCGLPANTDYDRDPVFAQILQAEPLKHAFQEARAGRAPSSVVISN 447
            :....|...:|            .|.:....|:|...|           ...|.......:..||
pombe    53 IATPLPQPSLK------------TPESPLSKRNPTIKQ-----------NRVRFDLPDDELSRSN 94

  Fly   448 IPAPVASLAELRGLNPATRAQLQSVGLDKNMLQSAVSNAPYYDRLFRSLHDKGISH--------- 503
            :.:|..:|     |..|:.:...|  |.|.:|....|.|...|..|.|..::..||         
pombe    95 VSSPEKTL-----LTSASTSTFDS--LKKELLPELPSLAYSDDDEFPSSPEELNSHVNYPDVRNV 152

  Fly   504 DQCHL-LQPMKQVHDWLLDDDQLLDEIDKVFADMANGCKDISYPKPSLGELPTSQSSD------- 560
            ..||. |||       |:|.| .:::..|.||            ...|..||..:||.       
pombe   153 YDCHTGLQP-------LVDHD-CIEDRQKTFA------------SKQLPTLPLQKSSKLSNRRPA 197

  Fly   561 -SGFHSKP-------PTPGYGSEDLTAGQGRFASIPGIEDMNMYPSCAGMPEQFQQLRLHGDEAS 617
             ..|||.|       |||                      .:..||.......||...|.....|
pombe   198 LHSFHSAPANSLYPLPTP----------------------TSQLPSNLSSNNLFQSDSLKPSMVS 240

  Fly   618 GKNSTRTIL--------CADCNQPIAMGEVAVKADRAGKEIAWHPGCFKCITCRELLADLVYFFH 674
            ...||:.:|        |..|...:..|.:   ...:||::  ||.||||.||.:.|..:.:::.
pombe   241 SHTSTKPVLYRGNSEKSCHSCGGSLRAGRI---ISASGKKL--HPQCFKCDTCSQNLEHVGFYYR 300

  Fly   675 QGQVFCGRDLAIRLKIPRCRACDELIFTKEYTAAEEATFHIK--------HFCCYQCDEPLAGQQ 731
            :|:.:|..|...:.. |||:.|.        |..|:...||.        |||. .|.|..    
pombe   301 EGKFYCHLDYHEQFS-PRCKHCK--------TPIEDQAVHINNDWFHENHHFCA-GCSEVF---- 351

  Fly   732 YIADEKSNMPL--------CLLCYDRLFAVRCQRC-KVAIGPADQGVAWGDVHWHASCFVCAGVQ 787
                 ..|:|.        |..|||..:||:|::| |..:|.:.:|   .|..:|:.|:.|..  
pombe   352 -----NVNIPCIYRDDLYWCQTCYDNKYAVKCKKCRKPILGISVKG---SDGEYHSQCWTCGA-- 406

  Fly   788 CSKPLIG--GRFCVKENMPFCSP 808
            |: .|:|  |.|.: ||.|.|.|
pombe   407 CN-ALLGDEGYFMI-ENTPICRP 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 16/56 (29%)
LIM2_Testin_like 691..748 CDD:188727 17/72 (24%)
LIM 755..810 CDD:295319 19/57 (33%)
pxl1NP_596112.1 LIM 258..314 CDD:278823 17/60 (28%)
LIM 318..370 CDD:259829 14/69 (20%)
LIM 378..428 CDD:259829 19/57 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.