DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tes and ttx-3

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_001257168.1 Gene:ttx-3 / 181357 WormBaseID:WBGene00006654 Length:409 Species:Caenorhabditis elegans


Alignment Length:107 Identity:24/107 - (22%)
Similarity:48/107 - (44%) Gaps:13/107 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   687 RLKIPR--------CRACDELIFTKEYTAAEEATFHIKHFCCYQCDEPL--AGQQYIADEKSNMP 741
            :::||:        |..|...|..||.:..:...:|.....|..||.|.  :.:.|:.|   .:.
 Worm    96 QIQIPKIEPALLNQCCLCTFAIVDKEISVVDGKYYHNNCLRCQMCDIPFEYSDKCYVRD---GVF 157

  Fly   742 LCLLCYDRLFAVRCQRCKVAIGPADQGVAWGDVHWHASCFVC 783
            ||...:.:.:...|::|::.:...|..:...::.:|.:||||
 Worm   158 LCRADHAKRYQKCCRKCEIPLNREDMVMKAKEMIFHHACFVC 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726
LIM2_Testin_like 691..748 CDD:188727 15/66 (23%)
LIM 755..810 CDD:295319 8/29 (28%)
ttx-3NP_001257168.1 LIM 110..163 CDD:259829 14/55 (25%)
LIM 171..226 CDD:295319 8/29 (28%)
Homeobox 296..348 CDD:278475
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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